RegulonDB RegulonDB 11.1: Operon Form

rpnE-ypaA operon and associated TUs in Escherichia coli K-12 genome

Name: rpnE-ypaA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: rpnE-ypaA
Gene(s): rpnE, ypaA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -16.3 2356724 2356757 cctttctgatGCCCGGTAAGCATGTGGTTACCGGGCATTTTTGcgtacacgat
  anti-terminator -8.1 2356689 2356732 cgattacgctACTGGCCCAGGCGCTGGCTTAAACTCCTTTCTGATGCCCGGTAagcatgtggt
  anti-anti-terminator -9.4 2356660 2356709 gatgtccacaAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTaaactccttt
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"