RegulonDB RegulonDB 10.9: Operon Form

yfbU-hxpA operon and associated TUs in Escherichia coli K-12 genome

Name: yfbU-hxpA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: yfbU-hxpA
Gene(s): hxpA, yfbU   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Name: yfbUp
+1: 2412594
Distance from start of the gene: 0
Sequence: aaagaaggcatactcagccttcttttttttcaccgtagtagagtgatacaggagtcaacaAtggaaatgaccaacgcgcaa
Evidence: [TIM]
Reference(s): [1] Vesper O., et al., 2011

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -11.1 2412624 2412654 tacgcatataAAAGAAGGCATACTCAGCCTTCTTTTTTTTcaccgtagta
  anti-terminator -3.9 2412651 2412691 taaaactttcCTTGATGATTTGTAATTGACCCCTGATTACGCATATAAAAgaaggcatac
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"