RegulonDB RegulonDB 10.9: Operon Form

pdxI operon and associated TUs in Escherichia coli K-12 genome

Name: pdxI
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: pdxI
Gene(s): pdxI   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [1] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -15.8 1474033 1474069 gtgatccctaAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTgccggatgtg
  anti-terminator -5.3 1474017 1474047 ttctaattttTAGCATGTGATCCCTAAACCGCAACGCTGAtacaggttgc
  anti-anti-terminator -7.4 1473981 1474030 agcgataaagGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCctaaaccgca
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"