RegulonDB RegulonDB 10.8: Operon Form

yedN operon and associated TUs in Escherichia coli K-12 genome

Name: yedN
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Gene(s): yedN   Genome Browser M3D Gene expression COLOMBOS
Evidence: [IC] Inferred by curator
[ICWHO] Inferred computationally without human oversight

Regulation by sRNA    
  Small RNA name (Regulator) Regulation type Mechanism Function Binding Sites Evidence Reference
LeftPos RightPos Sequence (RNA-strand)
  gcvB unknown unknown repressor       [IMP] [1]
Notes: "The provided sequence is that of the RNA strand,i.e. 'U's are showed instead the 'T'"

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -6.7 2012419 2012453 gatgtttttaTTCATATTCCGGGCGATGGATATGAGCGATTTTTgatagtggta
  anti-terminator -5.9 2012450 2012483 cagtaacctcTGGATAATTTAATCTTTGTTGATGTTTTTATTCatattccggg
  anti-anti-terminator -5.8 2012481 2012521 catcaccacgTCGGATGTTGTTACGACCACAGACGCAACAGTAACCTCTGgataatttaa
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"