RegulonDB RegulonDB 11.1: Operon Form

rspR operon and associated TUs in Escherichia coli K-12 genome

Name: rspR
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: ydfH
Gene(s): rspR   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight
Name: ydfHp
+1: 1628326
Distance from start of the gene: 26
Sequence: tttatacccggcgtaactgccgggttattgcttgtcacaaaaaagtggtagactcatgcaGttaactcactcacaagcaag
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Salgado H, et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal PhoB-phosphorylated activator ydfHp 1628297 1628315 -20.0 gggttattgcTTGTCACAAAAAAGTGGTAgactcatgca nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] W [3]