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List of promoters with sites of this regulated phrase.
Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.
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Promoters and their regulatory phrases |
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| [DcuR,+] phrase |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [DcuR,+,-64] [DcuR,+,-13] | pckp | |||
| [DcuR,+,-63] [DcuR,+,-41] | dcuBp2 | |||
| [DcuR,+,-161] | [DcuR,+,-75] | aspAp | ||
| [DcuR,+,-98] | [DcuR,+,-37] | dpiBp2 | ||
| [DcuR,+,-106] | dctAp | |||
| [DcuR,+,-104] | frdAp | |||
| [DcuR,+,-104] | frdAp2 |
| [DcuR,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases. |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [Cra,+,-139.5] | [CRP,-,13.5] [CRP,+,-90.5] [DcuR,+,-64.0,-13.0] | pckp | ||
| [DcuR,+,-41.0,-63.0] | dcuBp2 | |||
| [NarL,-,-112.0] [DcuR,+,-161.0] | [NarL,-,-76.0,-67.0] [FNR,+,-40.5] [CRP,+,-90.5] [DcuR,+,-75.0] | aspAp | ||
| [DcuR,+,-98.0] | [NarL,-,25.0] [DcuR,+,-37.0] | dpiBp2 | ||
| [DcuR,+,-106.0] | [CRP,+,-81.5] | dctAp | ||
| [DcuR,+,-104.0] | [NarL,-,-26.0,14.0,-12.0,-4.0] [FNR,+,-45.5] | frdAp | ||
| [DcuR,+,-104.0] | [NarL,-,-12.0,-26.0,14.0,-4.0] [FNR,+,-45.5] | frdAp2 |
