RegulonDB RegulonDB 10.9: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [GadE,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[GadE,+] Regulatory phrases      

[GadE,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [GadE,+,-78.5]   yhiMp
    [GadE,+,-62.5]   gadBp2
    [GadE,+,-62.5]   gadBp
    [GadE,+,-51.5]   hdeDp
    [GadE,+,-51.5]   hdeDp2
    [GadE,+,-40]   yjbQp
  [GadE,+,-117.5] [GadE,+,9.5]   hdeAp
  [GadE,+,-117.5] [GadE,+,9.5]   hdeAp2
  [GadE,+,-198.5] [GadE,+,-63.5] [GadE,+,-30.5]   gadEp
  [GadE,+,-284]     gltBp2
  [GadE,+,-284]     gltBp


[GadE,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [GadE,+,-78.5] yhiMp
  [GadX,+,-119.5,-184.0,-231.5,-210.5,-98.5,-268.0] [GadW,-,-210.5,-119.5,-231.5,-98.5] [Fis,-,-105.0] [GadW,+,-98.5,-119.5,-210.5,-231.5] [GadX,+,-39.5,-17.5] [GadE,+,-62.5] [Fis,-,-27.0,-59.0] [CRP,-,-63.5] [RcsB,+,-64.5] [Fis,-,37.0] gadBp2
  [GadX,+,-268.0,-119.5,-231.5,-210.5,-98.5,-184.0] [GadW,-,-119.5,-210.5,-98.5,-231.5] [Fis,-,-105.0] [GadW,+,-98.5,-210.5,-119.5,-231.5] [GadX,+,-17.5,-39.5] [GadE,+,-62.5] [Fis,-,-59.0,-27.0] [CRP,-,-63.5] [RcsB,+,-64.5] [Fis,-,37.0] gadBp
  [GadX,+,-115.5,-94.5] [PhoP,+,-137.0] [GadE,+,-51.5] hdeDp
  [GadX,+,-94.5,-115.5] [PhoP,+,-137.0] [GadE,+,-51.5] hdeDp2
  [GadE,+,-40.0] yjbQp
  [GadX,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-116.0,-159.0,-97.0] [H-NS,-,-118.0] [GadW,-,-126.5] [GadW,+,-126.5] [GadX,+,-74.5,-53.5] [GadE,+,9.5] [TorR,+,-51.5,-27.5] [GadX,-,-74.5,-53.5] [Lrp,-,-55.0,-18.0,-64.0] [FliZ,-,8.0] [GadW,-,-74.5,-53.5] [GadW,+,-53.5,-74.5] [MarA,-,-39.0] [PhoP,+,-32.0] hdeAp
  [GadX,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-159.0,-97.0,-116.0] [H-NS,-,-118.0] [GadW,-,-126.5] [GadW,+,-126.5] [GadX,+,-74.5,-53.5] [GadE,+,9.5] [TorR,+,-51.5,-27.5] [GadX,-,-74.5,-53.5] [Lrp,-,-64.0,-55.0,-18.0] [FliZ,-,8.0] [GadW,-,-53.5,-74.5] [GadW,+,-53.5,-74.5] [MarA,-,-39.0] [PhoP,+,-32.0] hdeAp2
  [GadX,+,-595.5,-574.5] [GadE,+,-198.5] [GadW,+,-574.5,-595.5] [GadE,+,-30.5,-63.5] [FliZ,-,9.5] [CRP,-,-19.5] gadEp
  [GadE,+,-284.0] [Lrp,+,-108.0,-215.0,-152.0,-246.0] [ArgR,-,-352.0,-331.5] [IHF,+,-89.0,-85.0] [CRP,-,-65.5] [FNR,-,-26.5] gltBp2
  [GadE,+,-284.0] [Lrp,+,-108.0,-215.0,-152.0,-246.0] [ArgR,-,-352.0,-331.5] [IHF,+,-85.0,-89.0] [CRP,-,-65.5] [FNR,-,-26.5] gltBp

  

  

RegulonDB