RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase


List of promoters regulated by [NagC,-] regulatory phrase


List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases


[NagC,-] Regulatory phrases      

[NagC,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [NagC,-,-28]   ydePp
    [NagC,-,-14]   dinIp
    [NagC,-,2]   creAp
    [NagC,-,2]   galPp
    [NagC,-,7]   ptsHp3
    [NagC,-,13]   ptsHp
    [NagC,-,13]   ptsHp4
    [NagC,-,16]   ptsHp5
    [NagC,-,-80] [NagC,-,4]   manXp
  [NagC,-,-277] [NagC,-,-65]   nanCp
  [NagC,-,-244] [NagC,-,-22]   chiZp
  [NagC,-,-140] [NagC,-,-16]   ydeNp
  [NagC,-,-125] [NagC,-,-31]   nagEp
  [NagC,-,-112] [NagC,-,1]   chbBp
  [NagC,-,-101] [NagC,-,-7]   nagBp
  [NagC,-,-96]   [NagC,-,58] glmUp2

[NagC,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.