RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [PaaX,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[PaaX,-] Regulatory phrases      

[PaaX,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [PaaX,-,-6.5]   paaZp
    [PaaX,-,10.5]   paaXp
    [PaaX,-,30]   paaAp


[PaaX,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [CRP,+,-136.5] [PaaX,-,-6.5] [IHF,+,-80.0] paaZp
  [PaaX,-,10.5] paaXp
  [SlyA,+,-177.5] [IHF,+,-115.0] [SlyA,+,-74.5,-19.5] [PaaX,-,30.0] [CRP,+,-58.5] paaAp

  

  

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