RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [Rob,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[Rob,+] Regulatory phrases      

[Rob,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [Rob,+,-61.5]   marRp
    [Rob,+,-54]   zwfp
    [Rob,+,-52.5]   tolCp4
    [Rob,+,-51.5]   acnAp2
    [Rob,+,-43.5]   nfsBp
    [Rob,+,-41.5]   inaAp
    [Rob,+,-40.5]   tolCp3
    [Rob,+,-40.5]   ybjCp
    [Rob,+,-40.5]   sodAp
    [Rob,+,-40.5]   acrZp
    [Rob,+,-40]   micFp2
    [Rob,+,-40]   micFp1
    [Rob,+,-38.5]   nfop
    [Rob,+,-35.5]   fumCp1
  [Rob,+,-161]     aldAp


[Rob,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [AcrR,-,-40.5] [CpxR,+,-29.0] [MarR,-,17.0,-18.0] [MarA,+,-61.5] [SoxS,+,-61.5] [Rob,+,-61.5] [CRP,+,-52.5] [Fis,+,-81.0] [Cra,-,-72.5] marRp
  [MarA,+,-54.0] [SoxS,+,-51.5] [Rob,+,-54.0] [Cra,-,-35.5] zwfp
  [MarA,+,-52.5] [SoxS,+,-52.5] [Rob,+,-52.5] tolCp4
  [ArcA,-,-34.0] [MarA,+,-51.5] [SoxS,+,-51.5] [Rob,+,-51.5] [CRP,+,-40.5] [FNR,-,-40.5] acnAp2
  [MarA,+,-43.5] [SoxS,+,-43.5] [Rob,+,-43.5] nfsBp
  [MarA,+,-41.5] [SoxS,+,-41.5] [Rob,+,-41.5] inaAp
  [MarA,+,-40.5] [SoxS,+,-40.5] [Rob,+,-40.5] tolCp3
  [OxyR,-,-72.0,-50.0] [MarA,+,-40.5] [SoxS,+,-56.5,-40.5] [Rob,+,-40.5] ybjCp
  [CRP,+,-99.5] [ArcA,-,-38.0,-21.0,-10.0] [IHF,-,-24.0,-1.0,-68.0,-48.0] [MarA,+,-40.5] [SoxS,+,-44.0] [Rob,+,-40.5] [FNR,-,-37.5] [SoxR,+,9.0] [Fur,-,-33.0,-42.0,-36.0,-30.0] sodAp
  [MarA,+,-40.5] [SoxS,+,-40.5] [Rob,+,-40.5] acrZp
  [OmpR,+,-165.5,-206.5,-186.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [MarA,+,-40.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,122.0,58.5,87.5] micFp2
  [OmpR,+,-186.5,-165.5,-206.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [MarA,+,-40.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,58.5,87.5,122.0] micFp1
  [MarA,+,-38.5] [SoxS,+,-26.0,-37.0] [Rob,+,-38.5] nfop
  [Rob,+,-35.5] fumCp1
  [ArcA,-,-137.0,-157.0] [MarA,+,-161.0] [SoxS,+,-161.0] [Rob,+,-161.0] [ArcA,-,-5.0,13.0,2.0] [DnaA,-,-7.5] [CRP,+,-59.5] [FNR,-,-10.5] aldAp

  

  

RegulonDB