RegulonDB RegulonDB 10.9: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [SoxS,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[SoxS,+] Regulatory phrases      

[SoxS,+] phrase


[SoxS,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [Fis,-,-145.0,-119.0] [CRP,+,-94.5] [Mlc,-,-6.0] [ArcA,-,2.0,-48.0,-85.0] [SoxS,+,-83.5] [Fis,-,-80.0,3.0,-19.0] [CRP,+,-40.5] [Fis,+,-19.0,3.0] ptsGp1
  [AcrR,-,-22.5] [EnvR,-,-22.5] [MarA,+,-72.5] [SoxS,+,-72.5] [MprA,-,-16.0] [PhoP,-,32.0] acrAp
  [SoxS,+,-69.0] ribAp1
  [MarA,+,-65.0] [SoxS,+,-63.0] decRp
  [AcrR,-,-40.5] [CpxR,+,-29.0] [MarR,-,-18.0,17.0] [MarA,+,-61.5] [SoxS,+,-61.5] [Rob,+,-61.5] [CRP,+,-52.5] [Fis,+,-81.0] [Cra,-,-72.5] marRp
  [SoxS,+,-61.5] fldAp
  [SoxS,+,-61.5] [OxyR,+,-62.0,-40.0] uofp
  [MarA,+,-60.5] [SoxS,+,-60.5] poxBp
  [MarA,+,-60.5] [SoxS,+,-60.5] poxBp2
  [MarA,+,-58.5] [SoxS,+,-56.5] fprp
  [MarA,+,-52.5] [SoxS,+,-52.5] [Rob,+,-52.5] tolCp4
  [ArcA,-,-34.0] [MarA,+,-51.5] [SoxS,+,-51.5] [Rob,+,-51.5] [CRP,+,-40.5] [FNR,-,-40.5] acnAp2
  [MarA,+,-54.0] [SoxS,+,-51.5] [Rob,+,-54.0] [Cra,-,-35.5] zwfp
  [CRP,+,-99.5] [ArcA,-,-38.0,-21.0,-10.0] [IHF,-,-48.0,-24.0,-68.0,-1.0] [MarA,+,-40.5] [SoxS,+,-44.0] [Rob,+,-40.5] [FNR,-,-37.5] [SoxR,+,9.0] [Fur,-,-30.0,-33.0,-36.0,-42.0] sodAp
  [MarA,+,-43.5] [SoxS,+,-43.5] [Rob,+,-43.5] nfsBp
  [MarA,+,-43.0] [SoxS,+,-42.5] waaYp
  [MarA,+,-41.5] [SoxS,+,-41.5] [Rob,+,-41.5] inaAp
  [MarA,+,-40.5] [SoxS,+,-40.5] [Rob,+,-40.5] tolCp3
  [MarA,+,-40.5] [SoxS,+,-40.5] [Rob,+,-40.5] acrZp
  [MarA,+,-42.5] [SoxS,+,-40.0] pqiAp1
  [MarA,+,-42.5] [SoxS,+,-40.0] pqiAp3
  [SoxS,+,-39.5] pgip2
  [SoxS,+,-39.5] pgip
  [BasR,-,-52.5] [SoxS,+,-26.0] [PhoP,+,-28.0] [SoxR,+,36.0] yrbLp
  [SoxS,+,6.0] nepIp
  [CRP,?,-484.5] [MarA,+,-46.5] [SoxS,+,19.5] [CRP,+,-53.5] fumCp
  [OxyR,-,-50.0,-72.0] [MarA,+,-40.5] [SoxS,+,-40.5,-56.5] [Rob,+,-40.5] ybjCp
  [SoxS,+,-54.5,-50.5] ydbKp
  [SoxS,+,-38.0,-49.0] fldBp
  [MarA,+,-38.5] [SoxS,+,-37.0,-26.0] [Rob,+,-38.5] nfop
  [OmpR,+,-165.5,-186.5,-206.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [MarA,+,-40.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,58.5,122.0,87.5] micFp2
  [OmpR,+,-165.5,-186.5,-206.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [MarA,+,-40.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,122.0,87.5,58.5] micFp
  [ArcA,-,-157.0,-137.0] [MarA,+,-161.0] [SoxS,+,-161.0] [Rob,+,-161.0] [ArcA,-,-5.0,13.0,2.0] [DnaA,-,-7.5] [CRP,+,-59.5] [FNR,-,-10.5] aldAp

  

  

RegulonDB