RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by Fis,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


Fis,- Regulatory phrases      

Fis,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      ogtp
      acsp1
      narKp1
      gyrAp
      hyaAp
      rplMp
      cbpAp4
      nrfAp
      pyrDp
      pflBp1
      katEp
      rnpBp
      ansBp1
      yeaRp
      bglGp
      msrAp
      dpsp
      osmEp
      xylFp
      nanAp
      topAp1
      guaBp
    gyrBp
    narGp
    acsp2
    nirBp
    gltXp3
    gadAp
    acnBp
    aldBp
    crpp2
    crpp3
    hlyEp
    ptsGp1
    dusBp
    topAp4
    osmYp
    crpp1
    dmsAp1
    ptsGp2
    cspIp
  hupBp3
  glcCp
  gadBp
    hupBp2
      ndhp
      cbpAp6
      mtlAp


Fis,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [NarL,+,-74.0,-50.0,-83.0,-41.0] ogtp
  [IHF,-,-21.0] acsp1
  [IHF,+,-130.0] [NarL,+,-194.0,-154.0,-214.0,-160.0,-103.0,-177.0,-98.0] [NarL,+,-67.0,-90.0,-80.0] [FNR,+,-41.5,-79.5] narKp1
  [CspA,+,-108.0] [CspA,+,-60.0,-88.0] gyrAp
  [IscR,-,-42.0,-39.0] [YdeO,+,-61.0] [ArcA,+,-7.5,-67.0] [NarP,-,-10.0,7.0] [NarL,-,7.0,-10.0] hyaAp
  [CRP,-,-185.5] rplMp
  cbpAp4
  [NsrR,-,-121.0] [IHF,+,-127.0] [NsrR,-,-63.0] [NarP,+,-70.0,-79.0] [NarL,+,-79.0,-50.0,-70.0] [FNR,+,-41.5] [IHF,-,-55.0] [NarL,-,-22.0,-50.0] nrfAp
  [PurR,-,-58.5] pyrDp
  pflBp1
  katEp
  [Fis,+,-118.0,-156.0] [Fis,+,-50.0] rnpBp
  ansBp1
  [NsrR,-,-32.0] [NarP,+,-48.0,-39.0] [NarL,+,-48.0,-39.0] yeaRp
  [LeuO,+,-149.0,-118.0] [RcsB-BglJ,+,-95.5] [CRP,+,-61.5] [H-NS,-,680.0] bglGp
  msrAp
  [IHF,+,-98.5] [MntR,-,-17.5] [H-NS,-,3.5] [OxyR,+,-66.0,-17.0,-44.0] dpsp
  [IHF,-,4.5] osmEp
  [CRP,+,-180.5] [XylR,+,-61.5,-40.5] xylFp
  [CRP,+,-60.5] [NanR,-,6.5,-2.5,-11.5] nanAp
  [Fis,+,-178.0,-199.0,-94.0,-157.0,-129.0,-230.0,-256.0] [Fis,+,-62.0] topAp1
  [CRP,+,-117.5] [PurR,-,-24.5] [DnaA,-,248.0] guaBp
  gyrBp
  [IHF,+,-125.0] [NarL,+,-101.0,-195.0,-208.0,-185.0] [RstA,+,-276.0] [NarL,+,-79.0,-71.0,-57.0,-89.0] [FNR,+,-41.5] narGp
  [CRP,+,-122.5] [IHF,-,-180.0,-225.0,-153.0] [CRP,+,-69.5] acsp2
  [IHF,+,-115.0] [CRP,-,-296.5] [NarP,+,-65.0,-74.0] [NarL,+,-65.0,-74.0] [FNR,+,-41.5] [Cra,-,-15.5] [IHF,-,-88.0] [CRP,-,-41.5] nirBp
  gltXp3
  [TorR,-,-122.5] [GadW,-,-121.5,-100.5] [GadX,+,-100.5,-121.5] [GadW,+,-121.5,-100.5] [GadRcs,+,-62.5] [GadW,-,-78.0,-57.5] [RcsB,-,-18.5] [GadX,+,-57.5,-10.5,-31.5,-78.0] [CRP,-,-62.5] [GadW,+,-57.5,-78.0] [FNR,-,11.5] [TorR,-,73.5] gadAp
  [ArcA,-,-143.0,-119.0,-139.0,-170.0,-113.0] [ArcA,-,-48.0,-57.0] [CRP,+,-37.5] acnBp
  [CRP,+,-60.5] aldBp
  crpp2
  crpp3
  [SlyA,+,-44.5,-55.5] [H-NS,-,-56.5,-6.0] [CRP,+,-61.5] [FNR,+,-61.5] [H-NS,+,-56.5,-6.0] [SlyA,+,61.5,90.5,52.5,76.5] hlyEp
  [CRP,+,-94.5] [ArcA,-,-85.0,-48.0,2.0] [SoxS,+,-83.5] [CRP,+,-40.5] [Fis,+,-19.0,3.0] [Mlc,-,-6.0] ptsGp1
  [IHF,+,-114.0] [CRP,+,-167.5,-252.5] [CRP,+,-63.0] [CRP,-,-63.0] dusBp
  topAp4
  [Lrp,-,-186.0,-149.0] [IHF,-,-96.5] [IHF,-,-5.0] [CRP,-,-12.5,1.5] osmYp
  [CRP,+,-59.5] [Cra,+,-45.5] [CRP,-,41.5] crpp1
  [FNR,+,-41.5] [NarL,-,-27.0,15.0,-7.0] dmsAp1
  [Mlc,-,-35.0] ptsGp2
  [BasR,+,-137.5] cspIp
  [CRP,+,-83.5] hupBp3
  [CRP,+,-18.5] [Cra,-,-4.5] [GlcC,-,47.0] glcCp
  [GadW,-,-98.5,-231.5,-119.5,-210.5] [GadX,+,-231.5,-98.5,-210.5,-268.0,-184.0,-119.5] [GadW,+,-231.5,-210.5,-98.5,-119.5] [GadX,+,-17.5,-39.5] [GadE,+,-62.5] [CRP,-,-63.5] [RcsB,+,-64.5] gadBp
  hupBp2
  [Fis,+,-123.0] [FNR,-,-94.5] [PdhR,-,-35.0] [NsrR,-,6.0] [ArcA,-,-57.0] [Fis,+,-72.0] [IHF,-,-58.0,26.0,-17.0] [FNR,-,-50.5] [ArcA,-,68.0,52.0,57.0,36.0,66.0] ndhp
  cbpAp6
  [CRP,+,-219.5,-175.5,-261.5,-102.5] [CRP,+,-58.5] [Cra,-,-22.5] mtlAp

  

  

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