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Synonyms: ArcA-phosphorylated, ArcA |
Summary:
ArcA is a dual transcriptional regulator for Anoxic redox control [5, 64, 65]. It acts primarily as a negative transcriptional regulator under anaerobic conditions. ArcA represses operons involved in respiratory metabolism, including those that encode products such as the tricarboxylic acid cycle enzymes, enzymes of the glyoxylate shunt, and enzymes of the pathway for fatty acid degradation [65, 66, 67]. In addition, ArcA acts as a repressor for rpoS transcription [57]. ArcA also activates a few operons encoding proteins involved in fermentative metabolism [11, 68]. It has been identified as global repressor of carbon oxidation pathways [69]. Microarray analyses have identified a large number of genes affected by ArcA and have revealed that the Arc system and the FNR regulatory network overlap to a much greater extent than previously estimated [14, 24, 70, 71]. Read more > |
Transcription factor | ![]() ![]() |
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TF conformation(s): |
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Evolutionary Family: | OmpR | |||||||||||||||||||||
TFBs length: | 15 | |||||||||||||||||||||
Sensing class: | External-Two-component systems | |||||||||||||||||||||
Connectivity class: | Global Regulator | |||||||||||||||||||||
Gene name: | arcA | |||||||||||||||||||||
Genome position: | 4639590-4640306 | |||||||||||||||||||||
Length: | 717 bp / 238 aa | |||||||||||||||||||||
Operon name: | arcA | |||||||||||||||||||||
TU(s) encoding the TF: |
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Transcription factor regulation |
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Functional conformation | Function | Promoter | Sigma factor | Central Rel-Pos | Distance to first Gene | Genes | Sequence![]() |
LeftPos | RightPos | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | References | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ArcA-phosphorylated | repressor | aceBp | Sigma70 | nd | nd | aceB, aceA, aceK | nd | nd | [EXP-IMP-REACTION-BLOCKED] | W | [5] | ||
ArcA-phosphorylated | repressor | aceEp1 | Sigma70 | nd | nd | aceE, aceF | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [6] | ||
ArcA-phosphorylated | repressor | aceEp2 | Sigma38 | nd | nd | aceE, aceF | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [6] | ||
ArcA-phosphorylated | activator | ackAp | Sigma32 | nd | nd | ackA | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [6] | ||
ArcA-phosphorylated | repressor | acnAp2 | Sigma70 | -34.0 | -84.0 | acnA |
aatttgggttGTTATCAAATCGTTAcgcgatgttt
|
1335740 | 1335754 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [7] | |
ArcA-phosphorylated | repressor | acnBp1 | Sigma70 | -170.0 | -266.0 | acnB |
gaggcggtagTTTAAATTTTGACTAatcttgggat
|
131342 | 131356 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [7] | |
ArcA-phosphorylated | repressor | acnBp1 | Sigma70 | -143.0 | -239.0 | acnB |
cttgggattcGTTGAGAAAGGTGATtatcaccatg
|
131369 | 131383 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [7] | |
ArcA-phosphorylated | repressor | acnBp1 | Sigma70 | -139.0 | -235.0 | acnB |
ggattcgttgAGAAAGGTGATTATCaccatgcgaa
|
131373 | 131387 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [7] | |
ArcA-phosphorylated | repressor | acnBp1 | Sigma70 | -119.0 | -215.0 | acnB |
ttatcaccatGCGAATTAACGAAGTttttacggag
|
131393 | 131407 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP] | S | [7], [8] | |
ArcA-phosphorylated | repressor | acnBp1 | Sigma70 | -113.0 | -209.0 | acnB |
ccatgcgaatTAACGAAGTTTTTACggagggaaac
|
131399 | 131413 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [7] | |
ArcA-phosphorylated | repressor | acnBp1 | Sigma70 | -57.0 | -153.0 | acnB |
gattcagccaCTTTTTTATGTTGCTtttttgtaaa
|
131455 | 131469 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [7] | |
ArcA-phosphorylated | repressor | acnBp1 | Sigma70 | -48.0 | -144.0 | acnB |
acttttttatGTTGCTTTTTTGTAAacagattaac
|
131464 | 131478 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP] | S | [7], [8] | |
ArcA-phosphorylated | repressor | aldAp | Sigma70 | -157.0 | -199.0 | aldA |
aaagtcgctcGTTACGTTAAAAATTgcccgtttgt
|
1488026 | 1488040 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | nd | [9] | |
ArcA-phosphorylated | repressor | aldAp | Sigma70 | -137.0 | -179.0 | aldA |
aaattgcccgTTTGTGAACCACTTGtttgcaaacg
|
1488046 | 1488060 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | nd | [9] | |
ArcA-phosphorylated | repressor | aldAp | Sigma70 | -5.0 | -47.0 | aldA |
gatgattgatGTTAATTAACAATGTattcaccgaa
|
1488178 | 1488192 | [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [8], [9] | |
ArcA-phosphorylated | repressor | aldAp | Sigma70 | 2.0 | -41.0 | aldA |
tgatgttaatTAACAATGTATTCACcgaaaacaaa
|
1488184 | 1488198 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | nd | [9] | |
ArcA-phosphorylated | repressor | aldAp | Sigma70 | 13.0 | -30.0 | aldA |
aacaatgtatTCACCGAAAACAAACatataaatca
|
1488195 | 1488209 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [9] | |
ArcA-phosphorylated | activator | appCp | Sigma70 | nd | nd | appC, appB, appX, appA | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [10] | ||
ArcA-phosphorylated | activator | appCp2 | Sigma38 | nd | nd | appC, appB, appX, appA | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [10] | ||
ArcA-phosphorylated | activator | appYp2 | Sigma38 | -197.0 | -222.0 | appY |
agtgagtttaTGTTAATAAAAagcatagtaa
|
583454 | 583464 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | nd | [11] | |
ArcA-phosphorylated | repressor | arcZp | nd | -29.0 | -29.0 | arcZ |
aactgattcaTGTAACAAATCATTTaagttttgct
|
3350541 | 3350555 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [12] | |
ArcA-phosphorylated | repressor | betIp | Sigma70 | -74.0 | -101.0 | betI, betB, betA |
cactgttattGTTACTATTTAAAATcaaattcgta
|
329428 | 329442 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | W | ||
ArcA-phosphorylated | repressor | betIp | Sigma70 | -6.0 | -33.0 | betI, betB, betA |
tcaataaccgCTTTAATAGATAAACaccgctgatg
|
329360 | 329374 | [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | nd | [11], [13] | |
ArcA-phosphorylated | repressor | betTp | Sigma70 | 3.0 | -40.0 | betT |
tgtcttaattGTTACGAATTTGATTttaaatagta
|
329416 | 329430 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | W | [11] | |
ArcA-phosphorylated | repressor | betTp | Sigma70 | 15.0 | -28.0 | betT |
tacgaatttgATTTTAAATAGTAACaataacagtg
|
329428 | 329442 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | W | [13] | |
ArcA-phosphorylated | repressor | cadBp | Sigma70 | -179.0 | -254.0 | cadB, cadA |
ataatttttaTTACATAAATTTAACcagagaatgt
|
4360278 | 4360292 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | activator | caiTp | Sigma70 | -101.0 | -207.0 | caiT, caiA, caiB, caiC, caiD, caiE |
cagagcataaCAAACTGATTATTAAtcaaaattaa
|
42131 | 42145 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | activator | caiTp | Sigma70 | -91.0 | -197.0 | caiT, caiA, caiB, caiC, caiD, caiE |
caaactgattATTAATCAAAATTAAcgaaaaaacg
|
42121 | 42135 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | activator | caiTp | Sigma70 | 28.0 | -79.0 | caiT, caiA, caiB, caiC, caiD, caiE |
cgtccacgagGTTAATAATAATTATattaaatgtt
|
42003 | 42017 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | activator | caiTp | Sigma70 | 50.0 | -57.0 | caiT, caiA, caiB, caiC, caiD, caiE |
tatattaaatGTTAACAAAAATAAAacaaacggga
|
41981 | 41995 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | repressor | citCp1 | nd | 64.5 | -32.5 | citC, citD, citE, citF, citX, citG |
attcgttgcaAATCGATAACAacatgcacct
|
651884 | 651894 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | nd | [15] | |
ArcA-phosphorylated | activator | cydAp1 | Sigma70 | -315.0 | -603.0 | cydA, cydB |
ccctgggtgaGTTAATTATAATATAattataagtt
|
770848 | 770862 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [16], [17], [18] | |
ArcA-phosphorylated | activator | cydAp1 | Sigma70 | -304.0 | -592.0 | cydA, cydB |
ttaattataaTATAATTATAAGTTAactaaatgtt
|
770859 | 770873 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [16], [17], [18] | |
ArcA-phosphorylated | activator | cydAp1 | Sigma70 | -293.0 | -581.0 | cydA, cydB |
ataattataaGTTAACTAAATGTTAatattggcgg
|
770870 | 770884 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [11], [14], [16], [17], [18], [19], [20] | |
ArcA-phosphorylated | activator | cydAp1 | Sigma70 | -84.0 | -372.0 | cydA, cydB |
aagttaccttATTGAAACATGATTAacataatttg
|
771079 | 771093 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | S | [11], [14], [16], [17], [18], [19], [20] | |
ArcA-phosphorylated | activator | cydAp1 | Sigma70 | 135.0 | -154.0 | cydA, cydB |
ggatcaatttGAGTTTTTATTAACAtgtttgcaac
|
771297 | 771311 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [16], [17], [18], [21] | |
ArcA-phosphorylated | activator | cydAp2 | Sigma70 | -77.5 | -251.5 | cydA, cydB |
cggtaatttaGCTATAAATTGATCAccgtcgaaaa
|
771199 | 771213 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [11], [16], [17], [18] | |
ArcA-phosphorylated | activator | cydAp3 | Sigma70 | nd | nd | cydA, cydB | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [16], [17], [18], [22], [23] | ||
ArcA-phosphorylated | activator | cydAp4 | Sigma70 | nd | nd | cydA, cydB | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [16], [17], [18], [22], [23] | ||
ArcA-phosphorylated | activator | cydDp | Sigma70 | -44.0 | -113.0 | cydD, cydC |
gcaaaataatTTTACAAATCAGTAACaaaagtaaag
|
931068 | 931083 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-CHIP] | S | [8], [17] | |
ArcA-phosphorylated | repressor | cyoAp | Sigma70 | -200.0 | -243.0 | cyoA, cyoB, cyoC, cyoD, cyoE |
ataattatttGTTAAATAATTGTTTtatttcacat
|
451846 | 451860 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | S | [8], [11], [19], [24] | |
ArcA-phosphorylated | repressor | dctAp | Sigma70 | nd | nd | dctA | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [25] | ||
ArcA-phosphorylated | activator | dcuCp | nd | -340.0 | -455.0 | dcuC |
gcttgttcaaGTTAAATATTTCCGCgcatcgatta
|
656416 | 656430 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [26] | |
ArcA-phosphorylated | activator | dpiBp1 | nd | -95.5 | -346.5 | dpiB, dpiA |
aggtgcatgtTGTTATCGATTtgcaacgaat
|
651884 | 651894 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [15] | |
ArcA-phosphorylated | repressor | fadBp | Sigma70 | -29.0 | -71.0 | fadB, fadA |
aatcttttgtTTGCATATTTTTAACacaaaataca
|
4031035 | 4031049 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [14], [27] | |
ArcA-phosphorylated | repressor | fadDp | Sigma70 | -7.0 | -68.0 | fadD, sroD |
ggtatgatgaGTTAATATTATGTTAacggcatgta
|
1889807 | 1889821 | [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [8], [27] | |
ArcA-phosphorylated | repressor | fadEp | nd | 15.0 | -89.0 | fadE |
gctttgttgtAATTATATTGTAAACatattgctaa
|
243385 | 243399 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [8], [27] | |
ArcA-phosphorylated | repressor | fadHp | nd | 19.0 | -23.0 | fadH |
tccgaccacaTAACAATTATTTTACatactggaca
|
3231635 | 3231649 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP] | S | [8], [27], [28] | |
ArcA-phosphorylated | repressor | fadIp | Sigma70 | -17.0 | -59.0 | fadI, fadJ |
ttggctaaatGTAAAAAAATGGTTAagactatgat
|
2460521 | 2460535 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [27] | |
ArcA-phosphorylated | repressor | fadLp | Sigma38 | -38.0 | -139.0 | fadL |
aaaaagatagAAACATACTTGCAACattccagctg
|
2461160 | 2461174 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | nd | ||
ArcA-phosphorylated | repressor | fnrp | Sigma70 | nd | nd | fnr | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [6] | ||
ArcA-phosphorylated | activator | focAp1 | Sigma70 | -251.0 | -278.0 | focA, pflB |
tataaggttaAATATCGGTAATTTGtatttaataa
|
954737 | 954751 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP] | S | [8], [29] | |
ArcA-phosphorylated | activator | focAp1 | Sigma70 | -114.0 | -141.0 | focA, pflB |
tttatttttaTTTGGATAATCAAATatttactccg
|
954600 | 954614 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [8], [29], [30], [31], [32], [33] | |
ArcA-phosphorylated | activator | focAp1 | Sigma70 | -6.0 | -33.0 | focA, pflB |
ataatgctttGTTAGTATCTCGTCGccgacttaat
|
954492 | 954506 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [29] | |
ArcA-phosphorylated | activator | focAp2 | Sigma70 | 5.0 | -33.0 | focA, pflB |
ataatgctttGTTAGTATCTCGTCGccgacttaat
|
954492 | 954506 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [29] | |
ArcA-phosphorylated | repressor | fumAp | Sigma70 | nd | nd | fumA, fumC | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [34] | ||
ArcA-phosphorylated | activator | fumBp | Sigma70 | nd | nd | fumB | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [35] | ||
ArcA-phosphorylated | repressor | fumCp2 | Sigma38 | nd | nd | fumC | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | |||
ArcA-phosphorylated | activator | gadAp | Sigma70 | nd | nd | gadA, gadX | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [24] | ||
ArcA-phosphorylated | activator | gadAp2 | Sigma38 | nd | nd | gadA, gadX | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [24] | ||
ArcA-phosphorylated | activator | gadEp1 | Sigma38 | nd | nd | gadE, gadF | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [36] | ||
ArcA-phosphorylated | activator | gadEp3 | Sigma70 | nd | nd | gadE, gadF | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [36] | ||
ArcA-phosphorylated | repressor | gatYp | Sigma70 | nd | nd | gatY, gatZ, gatA, gatB, gatC, gatD | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [24] | ||
ArcA-phosphorylated | repressor | glcDp | Sigma70 | -111.0 | -166.0 | glcD, glcE, glcF, glcG, glcB, glcA |
aagtgattatGTTACATCAATTTAAcattgagtta
|
3128180 | 3128194 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [37] | |
ArcA-phosphorylated | repressor | glcDp | Sigma70 | -104.0 | -159.0 | glcD, glcE, glcF, glcG, glcB, glcA |
tatgttacatCAATTTAACATTGAGttaaccaaga
|
3128173 | 3128187 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-PATTERN-DISCOVERY], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [14], [37] | |
ArcA-phosphorylated | repressor | glpABCp | Sigma70 | nd | nd | glpA, glpB, glpC | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [38] | ||
ArcA-phosphorylated | repressor | glpDp | Sigma70 | nd | nd | glpD | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [38] | ||
ArcA-phosphorylated | repressor | gltAp1 | Sigma70 | -47.0 | -346.0 | gltA |
tgacaatcatTCAACAAAGTTGTTAcaaacattac
|
754807 | 754821 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | S | [8], [11], [17], [24], [39], [40] | |
ArcA-phosphorylated | activator | grcAp1 | Sigma70 | -99.0 | -173.0 | grcA |
ttcacacccgCATAAGTTGATGTAAaacaataaaa
|
2716615 | 2716629 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [41] | |
ArcA-phosphorylated | activator | grcAp1 | Sigma70 | -82.0 | -156.0 | grcA |
tgatgtaaaaCAATAAAATCCATTTgcgaccatac
|
2716598 | 2716612 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [41] | |
ArcA-phosphorylated | activator | hemAp1 | Sigma70 | nd | nd | hemA, prfA, prmC | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [42], [43] | ||
ArcA-phosphorylated | activator | hyaAp | Sigma70 | -67.0 | -222.0 | hyaA, hyaB, hyaC, hyaD, hyaE, hyaF |
aaaaataggtCCATTTTTATCGCTAaaagataaat
|
1031910 | 1031924 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [44] | |
ArcA-phosphorylated | activator | hyaAp | Sigma70 | -7.5 | -162.5 | hyaA, hyaB, hyaC, hyaD, hyaE, hyaF |
gtgcaaaagtTTCACTACGCTTTATTAACAATActttctggcg
|
1031966 | 1031988 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [45] | |
ArcA-phosphorylated | activator | hyaAp2 | Sigma38 | -67.0 | -222.0 | hyaA, hyaB, hyaC, hyaD, hyaE, hyaF |
aaaaataggtCCATTTTTATCGCTAaaagataaat
|
1031910 | 1031924 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [44] | |
ArcA-phosphorylated | activator | hyaAp2 | Sigma38 | -7.5 | -162.5 | hyaA, hyaB, hyaC, hyaD, hyaE, hyaF |
gtgcaaaagtTTCACTACGCTTTATTAACAATActttctggcg
|
1031966 | 1031988 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [45] | |
ArcA-phosphorylated | repressor | hybOp1 | Sigma70 | -57.0 | -159.0 | hybO, hybA, hybB, hybC, hybD, hybE, hybF, hybG |
attatcttgcTTTAATTAATTACACtaatgcttct
|
3146413 | 3146427 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [44] | |
ArcA-phosphorylated | repressor | icdAp1 | Sigma70 | -3.0 | -118.0 | icd |
caatagggtaGTATTGACAAGCCAATtacaaatcat
|
1194998 | 1195013 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [17], [24], [46], [47] | |
ArcA-phosphorylated | repressor | icdAp1 | Sigma70 | 16.0 | -100.0 | icd |
aagccaattaCAAATCATTAACAAAAaattgctcta
|
1195016 | 1195031 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [8], [17], [24], [46], [47] | |
ArcA-phosphorylated | activator | iraMp1 | nd | -170.5 | -257.5 | iraM |
ataaaggctaTGTTTTAATTACAGGatgttcagtc
|
1212253 | 1212267 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | nd | [48] | |
ArcA-phosphorylated | activator | iraMp1 | nd | -16.5 | -103.5 | iraM |
tataagccatCATTTTAATTAATTTatttttttga
|
1212099 | 1212113 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | nd | [48] | |
ArcA-phosphorylated | repressor | lldPp | Sigma70 | -18.0 | -128.0 | lldP, lldR, lldD |
gttgccaataCATAACATTTAGTTAaccattcatt
|
3777264 | 3777278 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [11], [14], [16] | |
ArcA-phosphorylated | repressor | lldPp | Sigma70 | 10.0 | -101.0 | lldP, lldR, lldD |
cattcattgtCATTATCCCTACACAacacaattgg
|
3777291 | 3777305 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [14], [16] | |
ArcA-phosphorylated | repressor | lpdAp | Sigma70 | -27.0 | -222.0 | lpd |
cgtttgttgtTTAAAAATTGTTAACaattttgtaa
|
127683 | 127697 | [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP] | S | [8] | |
ArcA-phosphorylated | repressor | lpdAp | Sigma70 | -18.0 | -213.0 | lpd |
tttaaaaattGTTAACAATTTTGTAaaataccgac
|
127692 | 127706 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-MICROARRAY], [COMP-AINF-PATTERN-DISCOVERY], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-CHIP], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | C | [8], [24], [49], [50] | |
ArcA-phosphorylated | repressor | mdhp1 | Sigma70 | 27.0 | -19.0 | mdh |
catatcttagTTTATCAATATAATAaggagtttag
|
3384280 | 3384294 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | W | [11], [24], [51] | |
ArcA-phosphorylated | activator | moeAp | Sigma70 | -137.0 | -167.0 | moeA, moeB |
tggttcgccaCTTTTGCTATAAATAtcagaatttt
|
866524 | 866538 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [52] | |
ArcA-phosphorylated | repressor | ndhp | Sigma70 | -57.0 | -150.0 | ndh |
cttttcagcaACAAAACTTGATTAAcatcaatttt
|
1165928 | 1165942 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [53] | |
ArcA-phosphorylated | repressor | ndhp | Sigma70 | 36.0 | -58.0 | ndh |
gtaacctgttGTTAATTAAGAGCTAtgttaataac
|
1166020 | 1166034 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [53] | |
ArcA-phosphorylated | repressor | ndhp | Sigma70 | 52.0 | -42.0 | ndh |
taagagctatGTTAATAACCATTAAttaacaattg
|
1166036 | 1166050 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [53] | |
ArcA-phosphorylated | repressor | ndhp | Sigma70 | 57.0 | -37.0 | ndh |
gctatgttaaTAACCATTAATTAACaattggttaa
|
1166041 | 1166055 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [53] | |
ArcA-phosphorylated | repressor | ndhp | Sigma70 | 66.0 | -28.0 | ndh |
ataaccattaATTAACAATTGGTTAataaatttaa
|
1166050 | 1166064 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [53] | |
ArcA-phosphorylated | repressor | ndhp | Sigma70 | 68.0 | -26.0 | ndh |
aaccattaatTAACAATTGGTTAATaaatttaagg
|
1166052 | 1166066 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14], [53] | |
ArcA-phosphorylated | repressor | nuoAp2 | Sigma70 | -108.0 | -198.0 | nuoA, nuoB, nuoC, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN |
tgctaatggtGTTGATATTATGTAAactaatgtga
|
2405263 | 2405277 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS], [EXP-IMP-SITE-MUTATION] | W | [11], [17], [24] | |
ArcA-phosphorylated | repressor | ompWp | nd | 1.5 | -28.5 | ompW |
tgtaggtataTTCGTCACGTTTTTATAACcataacgacg
|
1313983 | 1314001 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [54] | |
ArcA-phosphorylated | repressor | oppAp | Sigma28 | nd | nd | oppA, oppB, oppC, oppD, oppF | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [24] | ||
ArcA-phosphorylated | repressor | ptsGp1 | nd | -85.0 | -188.0 | ptsG |
tgtgacatatGTTTTGTCAAAATGTgcaacttctc
|
1157674 | 1157688 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [55] | |
ArcA-phosphorylated | repressor | ptsGp1 | nd | -48.0 | -151.0 | ptsG |
atgatctgaaGTTGAAACGTGATAGccgtcaaaca
|
1157711 | 1157725 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [55] | |
ArcA-phosphorylated | repressor | ptsGp1 | nd | 2.0 | -102.0 | ptsG |
tattttactcTGTGTAATAAATAAAgggcgcttag
|
1157760 | 1157774 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [55] | |
ArcA-phosphorylated | repressor | puuAp | Sigma38 | -165.0 | -225.0 | puuA, ymjE, puuP |
cgataaccggATTGTTCATTATATTttccatgctc
|
1361126 | 1361140 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [48] | |
ArcA-phosphorylated | repressor | puuDp | Sigma38 | 82.0 | 14.0 | puuD, puuR, puuC, puuB, puuE |
gagcatggaaAATATAATGAACAATccggttatcg
|
1361126 | 1361140 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [48] | |
ArcA-phosphorylated | repressor | rhaTp | Sigma70 | -184.0 | -225.0 | rhaT |
gtaagcagttGGTTCATTATAGTTAattaaatgat
|
4100743 | 4100757 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | repressor | rhaTp | Sigma70 | -173.0 | -214.0 | rhaT |
gttcattataGTTAATTAAATGATAttgaaaatga
|
4100732 | 4100746 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | repressor | rhaTp | Sigma70 | -156.0 | -197.0 | rhaT |
aaatgatattGAAAATGATTATCAAtgccgtactt
|
4100715 | 4100729 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | repressor | rmfp | nd | nd | nd | rmf | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-GSELEX], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [56] | ||
ArcA-phosphorylated | repressor | rpoSp | Sigma70 | -64.0 | -631.0 | rpoS |
agagcaaggaGTTGTGATCAAGCCTgcacaaaatt
|
2868175 | 2868189 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [57] | |
ArcA-phosphorylated | repressor | rpoSp | Sigma70 | 24.0 | -544.0 | rpoS |
tgaacagagtGCTAACAAAATGTTGccgaacaaca
|
2868088 | 2868102 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [57] | |
ArcA-phosphorylated | repressor | rpsJp | Sigma70 | nd | nd | rpsJ, rplC, rplD, rplW, rplB, rpsS, rplV, rpsC, rplP, rpmC, rpsQ | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [24] | ||
ArcA-phosphorylated | repressor | rsdp2 | Sigma70 | nd | nd | rsd | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-GSELEX], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [56] | ||
ArcA-phosphorylated | activator | rutAp | Sigma54 | -97.0 | -112.0 | rutA, rutB, rutC, rutD, rutE, rutF, rutG |
ctgttttgacCGTTTAGTCCACTTTttaccagata
|
1074116 | 1074130 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [24] | |
ArcA-phosphorylated | activator | sdhCp | Sigma70 | -211.0 | -430.0 | sdhC, sdhD, sdhA, sdhB, sucA, sucB, sucC, sucD, sdhX |
tgttacataaGTTAATCTTAGGTGAaataccgact
|
754740 | 754754 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | ||
ArcA-phosphorylated | activator | sdhCp | Sigma70 | -137.0 | -356.0 | sdhC, sdhD, sdhA, sdhB, sucA, sucB, sucC, sucD, sdhX |
ttgtaacaacTTTGTTGAATGATTGtcaaattaga
|
754814 | 754828 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [58] | |
ArcA-phosphorylated | repressor | sdhCp | Sigma70 | -32.0 | -251.0 | sdhC, sdhD, sdhA, sdhB, sucA, sucB, sucC, sucD, sdhX |
atgtaggttaATTGTAATGATTTTGtgaacagcct
|
754919 | 754933 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [5], [11] | |
ArcA-phosphorylated | repressor | sdhCp | Sigma70 | -27.0 | -246.0 | sdhC, sdhD, sdhA, sdhB, sucA, sucB, sucC, sucD, sdhX |
ggttaattgtAATGATTTTGTGAACagcctatact
|
754924 | 754938 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [5], [58] | |
ArcA-phosphorylated | repressor | sdhCp | Sigma70 | 257.0 | 38.0 | sdhC, sdhD, sdhA, sdhB, sucA, sucB, sucC, sucD, sdhX |
acaaagacctGTTAATCTGGACCTAcagaccatcc
|
755207 | 755221 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [58] | |
ArcA-phosphorylated | repressor | sodAp | Sigma70 | -38.0 | -89.0 | sodA |
aaagtacggcATTGATAATCATTTTcaatatcatt
|
4100714 | 4100728 | [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | nd | [59] | |
ArcA-phosphorylated | repressor | sodAp | Sigma70 | -21.0 | -72.0 | sodA |
atcattttcaATATCATTTAATTAActataatgaa
|
4100731 | 4100745 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | nd | [59] | |
ArcA-phosphorylated | repressor | sodAp | Sigma70 | -10.0 | -61.0 | sodA |
tatcatttaaTTAACTATAATGAACcaactgctta
|
4100742 | 4100756 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | nd | [59] | |
ArcA-phosphorylated | repressor | ssbp1 | Sigma70 | -153.5 | -186.5 | ssb |
ggcgatcacaAACGGTTAATTATGAcacaaattga
|
4273931 | 4273945 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp1 | Sigma70 | -90.5 | -123.5 | ssb |
attacccggaGTGTTGTGTAACAATgtctggccag
|
4273994 | 4274008 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp1 | Sigma70 | -50.5 | -83.5 | ssb |
tttcccggaaCCGAGGTCACAACATagtaaaagcg
|
4274034 | 4274048 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp1 | Sigma70 | -7.5 | -40.5 | ssb |
aatggtacaaTCGCGCGTTTACACTtattcagaac
|
4274077 | 4274091 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp2 | Sigma70 | -141.5 | -186.5 | ssb |
ggcgatcacaAACGGTTAATTATGAcacaaattga
|
4273931 | 4273945 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp2 | Sigma70 | -78.5 | -123.5 | ssb |
attacccggaGTGTTGTGTAACAATgtctggccag
|
4273994 | 4274008 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp2 | Sigma70 | -38.5 | -83.5 | ssb |
tttcccggaaCCGAGGTCACAACATagtaaaagcg
|
4274034 | 4274048 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp2 | Sigma70 | 5.5 | -40.5 | ssb |
aatggtacaaTCGCGCGTTTACACTtattcagaac
|
4274077 | 4274091 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp3 | Sigma70 | -72.5 | -186.5 | ssb |
ggcgatcacaAACGGTTAATTATGAcacaaattga
|
4273931 | 4273945 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp3 | Sigma70 | -9.5 | -123.5 | ssb |
attacccggaGTGTTGTGTAACAATgtctggccag
|
4273994 | 4274008 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp3 | Sigma70 | 31.5 | -83.5 | ssb |
tttcccggaaCCGAGGTCACAACATagtaaaagcg
|
4274034 | 4274048 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | ssbp3 | Sigma70 | 74.5 | -40.5 | ssb |
aatggtacaaTCGCGCGTTTACACTtattcagaac
|
4274077 | 4274091 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | sucAp | Sigma38 | nd | nd | sucA, sucB, sucC, sucD, sdhX | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [61] | ||
ArcA-phosphorylated | repressor | tpxp | Sigma70 | -22.0 | -55.0 | tpx |
cgtttgctgtGTTATTGACAGTTAGcataaactag
|
1388859 | 1388873 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] | W | [62] | |
ArcA-phosphorylated | activator | treBp | Sigma70 | -237.0 | -267.0 | treB, treC |
ggcgagcgtcGGTAATACGCCGTTAatgaaattcc
|
4466440 | 4466454 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] | |
ArcA-phosphorylated | repressor | ubiCp | Sigma70 | nd | nd | ubiC, ubiA | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS] | W | [63] | ||
ArcA-phosphorylated | repressor | uvrAp | Sigma70 | -148.5 | -213.5 | uvrA |
gttctgaataAGTGTAAACGCGCGAttgtaccatt
|
4274077 | 4274091 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | uvrAp | Sigma70 | -105.5 | -170.5 | uvrA |
cgcttttactATGTTGTGACCTCGGttccgggaaa
|
4274034 | 4274048 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | uvrAp | Sigma70 | -65.5 | -130.5 | uvrA |
ctggccagacATTGTTACACAACACtccgggtaat
|
4273994 | 4274008 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | repressor | uvrAp | Sigma70 | -2.5 | -67.5 | uvrA |
tcaatttgtgTCATAATTAACCGTTtgtgatcgcc
|
4273931 | 4273945 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [60] | |
ArcA-phosphorylated | activator | xylRp | nd | nd | nd | xylR | nd | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [24] | ||
ArcA-phosphorylated | activator | ybdNp | Sigma70 | 64.5 | -53.5 | ybdN |
acagtgtttaCTTTATAATTAACAGacttatctca
|
636615 | 636629 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | nd | [48] | |
ArcA-phosphorylated | repressor | ydeAp | nd | 16.0 | -58.0 | ydeA |
aatgcattgtATTCACATCATTAACcgttttaaga
|
1616963 | 1616977 | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [14] |