RegulonDB RegulonDB 10.8: Regulon Form
   
   


PaaX regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
PaaX      Tractordb tool
Connectivity class Local Regulator
Sensing Class Using internal synthesized signals
Synonym(s): DNA-binding transcriptional repressor PaaX, YdbY
Gene name(s): paaX
Functional conformation(s): PaaX-phenylacetyl-CoA , PaaX
Coregulator(s): CRP, IHF, PaaX, SlyA
Summary: TF Summary ...[more]

REGULATION EXERTED BY PaaX Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
PaaX repressor    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
PaaX repressor paaXp paaX , paaY 1463500 1463538 10.5 acctgtgctaTGATTCATAAATCACAACAATAACAACAGACTGAAGCGAatgagtaaac [APIORCISFBSCS]
[BPP]
[1]

Evidence: [APIORCISFBSCS] A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.
[BPP] Binding of purified proteins
Reference(s): [1] Fernandez C., et al., 2014



Reference(s)    

 [1] Fernandez C., Diaz E., Garcia JL., 2014, Insights on the regulation of the phenylacetate degradation pathway from Escherichia coli., Environ Microbiol Rep 6(3):239-50


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