RegulonDB RegulonDB 10.9: Regulon Form
   
   


IHF,UvrY regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
UvrY      Tractordb tool
Connectivity class Local Regulator
Sensing Class External-Two-component systems
Synonym(s): DNA-binding transcriptional activator UvrY, UvrY response regulator, YecB
Gene name(s): uvrY
Functional conformation(s): UvrY-phosphorylated , UvrY
Coregulator(s): CRP, EvgA, H-NS, IHF, NagC, NarL, NarP, PhoP, RcsB, UhpA, UvrY
Summary: TF Summary ...[more]
TRANSCRIPTION FACTOR: Info
Name:
IHF      Tractordb tool
Connectivity class Global Regulator
Synonym(s): DNA-binding transcriptional dual regulator IHF
Gene name(s): ihfB, ihfA
Functional conformation(s): IHF
Coregulator(s): AcrR, AdiY, ArcA, ArgR, AtoC, BasR, BolA, BtsR, CRP, Cbl, CpxR, Cra, CsgD, CysB, DksA, DksA-ppGpp, EnvY, FNR, FadR, FhlA, Fis, FlhDC, FliZ, Fur, GadE, GlcC, GlpR, GlrR, H-NS, HU, HdfR, HipAB, HipB, IHF, IclR, IscR, LrhA, Lrp, MarA, MatA, MlrA, MntR, ModE, MprA, MqsA, Nac, NagC, NanR, NarL, NarP, NorR, NsrR, NtrC, OmpR, OxyR, PaaX, PdhR, PepA, PhoB, PspF, PurR, QseB, RcdA, RcsAB, Rob, RstA, RtcR, RutR, SlyA, SoxR, SoxS, SutR, TdcA, TdcR, TrpR, TyrR, UlaR, UvrY, YeiL, YiaJ, YjjQ, ppGpp
Summary: TF Summary ...[more]

REGULATION EXERTED BY IHF,UvrY Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
IHF activator UvrY activator    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
UvrY-phosphorylated activator csrBp csrB 2924698 2924716 -183.0 ccccatctggTTGTGAGAGATCTCTTACAgactctgtag   [1]
IHF activator csrBp csrB 2924617 2924629 -99.0 ttttcatttaAAATCAAAATGTTGattgttaatt   [1]

Reference(s): [1] Zere TR., et al., 2015



Reference(s)    

 [1] Zere TR., Vakulskas CA., Leng Y., Pannuri A., Potts AH., Dias R., Tang D., Kolaczkowski B., Georgellis D., Ahmer BM., Romeo T., 2015, Genomic Targets and Features of BarA-UvrY (-SirA) Signal Transduction Systems., PLoS One 10(12):e0145035


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