RegulonDB RegulonDB 10.9: Regulon Form
   
   


IHF,UlaR regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
UlaR Weight Matrix      Tractordb tool
Connectivity class Local Regulator
Synonym(s): DNA-binding transcriptional repressor UlaR, YjfQ
Gene name(s): ulaR
Functional conformation(s): UlaR , UlaR-L-ascorbate 6-phosphate
Coregulator(s): CRP, IHF, UlaR
Summary: TF Summary ...[more]
TRANSCRIPTION FACTOR: Info
Name:
IHF Weight Matrix      Tractordb tool
Connectivity class Global Regulator
Synonym(s): DNA-binding transcriptional dual regulator IHF
Gene name(s): ihfB, ihfA
Functional conformation(s): IHF
Coregulator(s): AcrR, AdiY, ArcA, ArgR, AtoC, BasR, BolA, BtsR, CRP, Cbl, CpxR, Cra, CsgD, CysB, DksA, DksA-ppGpp, EnvY, FNR, FadR, FhlA, Fis, FlhDC, FliZ, Fur, GadE, GlcC, GlpR, GlrR, H-NS, HU, HdfR, HipAB, HipB, IHF, IclR, IscR, LrhA, Lrp, MarA, MatA, MlrA, MntR, ModE, MprA, MqsA, Nac, NagC, NanR, NarL, NarP, NorR, NsrR, NtrC, OmpR, OxyR, PaaX, PdhR, PepA, PhoB, PspF, PurR, QseB, RcdA, RcsAB, Rob, RstA, RtcR, RutR, SlyA, SoxR, SoxS, SutR, TdcA, TdcR, TrpR, TyrR, UlaR, UvrY, YeiL, YiaJ, YjjQ, ppGpp
Summary: TF Summary ...[more]

REGULATION EXERTED BY IHF,UlaR Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
IHF repressor UlaR repressor    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
UlaR repressor ulaGp ulaG 4419666 4419685 -0.5 aaatagtgtcAGGATTAATCAAAACCAATCAcatattgatt   [1]
[2]
[3]
UlaR repressor ulaGp ulaG 4419641 4419660 25.5 caatcacataTTGATTCGAATTGAACTATCAtgaaggtaaa   [1]
[2]
[3]
IHF repressor ulaGp ulaG

Reference(s): [1] Campos E., et al., 2002
[2] Campos E., et al., 2004
[3] Shimada T., et al., 2018



Reference(s)    

 [1] Campos E., Aguilar J., Baldoma L., Badia J., 2002, The gene yjfQ encodes the repressor of the yjfR-X regulon (ula), which is involved in L-ascorbate metabolism in Escherichia coli., J Bacteriol 184(21):6065-8

 [2] Campos E., Baldoma L., Aguilar J., Badia J., 2004, Regulation of expression of the divergent ulaG and ulaABCDEF operons involved in LaAscorbate dissimilation in Escherichia coli., J Bacteriol 186(6):1720-8

 [3] Shimada T., Ogasawara H., Ishihama A., 2018, Single-target regulators form a minor group of transcription factors in Escherichia coli K-12., Nucleic Acids Res 46(8):3921-3936


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