RegulonDB RegulonDB 10.9: Regulon Form
   
   


CRP,MalT regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
CRP Weight Matrix      Tractordb tool
Connectivity class Global Regulator
Sensing Class Using internal synthesized signals
Synonym(s): Cap, Csm, DNA-binding transcriptional dual regulator CRP, GurB
Gene name(s): crp
Functional conformation(s): CRP-cAMP , CRP
Coregulator(s): AcrR, AdiY, AgaR, AraC, ArcA, ArgP, ArgR, AscG, BasR, BolA, BtsR, CRP, CRP-Sxy, CaiF, ChbR, ComR, CpxR, Cra, CreB, CsgD, CspA, CsqR, CusR, CytR, DcuR, DeoR, DgoR, DksA-ppGpp, DnaA, DpiA, DsdC, EbgR, EnvY, EvgA, ExuR, FNR, FadR, FeaR, FhlA, Fis, FlhDC, FliZ, FucR, Fur, GadE, GadE-RcsB, GadW, GadX, GalR, GalS, GatR, GcvA, GlaR, GlcC, GlpR, GlrR, GntR, GutM, H-NS, HU, HdfR, HipB, HprR, HyfR, HypT, IHF, IclR, IdnR, LacI, LeuO, LexA, LrhA, Lrp, LsrR, MalI, MalT, MarA, MarR, MatA, McbR, MelR, MetJ, MhpR, Mlc, MlrA, ModE, MprA, MqsA, MurR, Nac, NadR, NagC, NanR, NarL, NarP, NrdR, NsrR, NtrC, OmpR, OxyR, PaaX, PdhR, PhoB, PhoP, PrpR, PurR, PuuR, QseB, RbsR, RcdA, RcsAB, RcsB, RcsB-BglJ, RhaR, RhaS, Rob, RstA, SdiA, SlyA, SoxR, SoxS, SrlR, StpA, TdcA, TdcR, TorR, TreR, UhpA, UidR, UlaR, UvrY, UxuR, XylR, YdeO, YiaJ, YjjQ, ZraR, ppGpp
Summary: TF Summary ...[more]
TRANSCRIPTION FACTOR: Info
Name:
MalT Weight Matrix      Tractordb tool
Connectivity class Local Regulator
Sensing Class Using internal synthesized signals
Synonym(s): DNA-binding transcriptional activator MalT, MalA
Gene name(s): malT
Functional conformation(s): MalT-maltotriose-ATP , MalT-maltotriose-ADP , MalT , MalT-Aes , MalT-MalK , MalT-MalY
Coregulator(s): CRP, CreB, FNR, Fis, H-NS, MalT, PhoP, StpA
Summary: TF Summary ...[more]

REGULATION EXERTED BY CRP,MalT Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
CRP activator MalT activator    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
CRP-cAMP activator malKp malK , lamB , malM 4246625 4246646 -100.5 ttccttacatGACCTCGGTTTAGTTCACAGAAGccgtgttctc    
MalT-maltotriose-ATP activator malKp malK , lamB , malM 4246657 4246666 -74.5 gccgtgttctCATCCTCCCGCctcctccccc    
MalT-maltotriose-ATP activator malKp malK , lamB , malM 4246667 4246676 -64.5 catcctcccgCCTCCTCCCCCataaaaaagc    
CRP-cAMP activator malKp malK , lamB , malM 4246559 4246580 -166.5 gaattggcggTAATGTGGAGATGCGCACATAAAatcgccacga   [1]
MalT-maltotriose-ATP activator malKp malK , lamB , malM 4246511 4246520 -220.5 cctccttgccCCTACGCCCCAccgtcgcttt   [1]
CRP-cAMP activator malKp malK , lamB , malM 4246530 4246551 -195.5 caccgtcgctTTGTGTGATCTCTGTTACAGAATtggcggtaat   [1]
CRP-cAMP activator malKp malK , lamB , malM 4246593 4246614 -132.5 tcgccacgatTTTTGCAAGCAACATCACGAAATtccttacatg   [1]
MalT-maltotriose-ATP activator malKp malK , lamB , malM 4246501 4246510 -230.5 ctctttccatCCTCCTTGCCCctacgcccca   [1]
MalT-maltotriose-ATP activator malKp malK , lamB , malM 4246691 4246700 -40.5 aaaaagccagGGGGTGGAGGAtttaagccat   [1]

Reference(s): [1] Raibaud O. 1989



Reference(s)    

 [1] Raibaud O., 1989, Nucleoprotein structures at positively regulated bacterial promoters: homology with replication origins and some hypotheses on the quaternary structure of the activator proteins in these complexes., Mol Microbiol 3(3):455-8


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