RegulonDB RegulonDB 10.9: Regulon Form
   
   


RelB,RelB-RelE regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
RelB Weight Matrix      Tractordb tool
Connectivity class Local Regulator
Synonym(s): Qin prophage, antitoxin RelB, Qin prophage, antitoxin of the RelE-RelB toxin-antitoxin system and DNA binding transcriptional repressor RelB, Qin prophage; antitoxin/DNA-binding transcriptional repressor RelB
Gene name(s): relB
Functional conformation(s): RelB
Coregulator(s): RelB, RelB-RelE
Summary: TF Summary ...[more]
TRANSCRIPTION FACTOR: Info
Name:
RelB-RelE      Tractordb tool
Connectivity class Local Regulator
Synonym(s): RelB-RelE antitoxin/toxin complex / DNA-binding transcriptional repressor
Gene name(s): relE, relB
Functional conformation(s): RelB-RelE
Coregulator(s): RelB, RelB-RelE
Summary: TF Summary ...[more]

REGULATION EXERTED BY RelB,RelB-RelE Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
RelB repressor RelB-RelE repressor    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
RelB repressor relBp hokD , relE , relB 1645897 1645908 1.5 tagtgcgataCTTGTAATGACATttgtaattac   [1]
[2]
RelB repressor relBp hokD , relE , relB 1645885 1645897 13.5 tgtaatgacaTTTGTAATTACAAgaggtgtaag   [2]
RelB-RelE repressor relBp hokD , relE , relB 1645911 1645922 -13.5 ccctaagcatGTTGTAGTGCGATacttgtaatg   [2]
RelB-RelE repressor relBp hokD , relE , relB 1645871 1645882 28.0 aattacaagaGGTGTAAGACATgggtagcatt   [2]
RelB-RelE repressor relBp hokD , relE , relB 1645897 1645908 1.5 tagtgcgataCTTGTAATGACATttgtaattac   [1]
[2]
RelB-RelE repressor relBp hokD , relE , relB 1645885 1645897 13.5 tgtaatgacaTTTGTAATTACAAgaggtgtaag   [2]

Reference(s): [1] Belliveau NM., et al., 2018
[2] Li GY., et al., 2008



Reference(s)    

 [1] Belliveau NM., Barnes SL., Ireland WT., Jones DL., Sweredoski MJ., Moradian A., Hess S., Kinney JB., Phillips R., 2018, Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria., Proc Natl Acad Sci U S A 115(21):E4796-E4805

 [2] Li GY., Zhang Y., Inouye M., Ikura M., 2008, Structural mechanism of transcriptional autorepression of the Escherichia coli RelB/RelE antitoxin/toxin module., J Mol Biol 380(1):107-19


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