RegulonDB

TRANSCRIPTION FACTOR:

Name:

CysB	Weight Matrix Tractordb tool

Connectivity class

Local Regulator

Sensing Class

Sensing external and internal signals

Synonym(s):

DNA-binding transcriptional dual regulator CysB, positive transcriptional regulator for cysteine regulon

Gene name(s):

cysB

Functional conformation(s):

CysB-O-acetyl-L-serine , CysB , CysB-N-acetyl-L-serine , CysB-Sulphide , CysB-Thiosulfate

Coregulator(s):

ArcA, Cbl, CpxR, CysB, FNR, H-NS, IHF, NtrC, PhoP

Summary:

TF Summary ...[more]

TRANSCRIPTION FACTOR:

Name:

NtrC	Weight Matrix Tractordb tool

Connectivity class

Local Regulator

Sensing Class

External-Two-component systems

Synonym(s):

DNA-binding transcriptional dual regulator NtrC, GlnG, GlnT, NtrC response regulator

Gene name(s):

glnG

Functional conformation(s):

NtrC-phosphorylated

Coregulator(s):

ArcA, ArgR, CRP, CysB, FNR, Fis, Fur, GadX, GlrR, IHF, Nac, NtrC, PhoP, RcsB, RutR, ppGpp

REGULATION EXERTED BY CysB,NtrC

Info M3D | Colombos

KNOWN BINDING SITES (The central relative position is relative to the promoter +1)
CysB activator NtrC activator
Transcription Factor		Regulated		Binding Sites				Evidence	References
Functional conformation	Function	Promoter	Gene(s)	LeftPos	RigthPos	Central Rel-Pos	Sequence
CysB-O-acetyl-L-serine	activator	cblp	cbl

Reference(s)
[1] Iwanicka-Nowicka R., Hryniewicz MM., 1995, A new gene, cbl, encoding a member of the LysR family of transcriptional regulators belongs to Escherichia coli cys regulon., Gene 166(1):11-7
[2] Zimmer DP., Soupene E., Lee HL., Wendisch VF., Khodursky AB., Peter BJ., Bender RA., Kustu S., 2000, Nitrogen regulatory protein C-controlled genes of Escherichia coli: scavenging as a defense against nitrogen limitation., Proc Natl Acad Sci U S A 97(26):14674-9