RegulonDB

TRANSCRIPTION FACTOR:

Name:

CysB	Weight Matrix Tractordb tool

Connectivity class

Local Regulator

Sensing Class

Sensing external and internal signals

Synonym(s):

DNA-binding transcriptional dual regulator CysB, positive transcriptional regulator for cysteine regulon

Gene name(s):

cysB

Functional conformation(s):

CysB-O-acetyl-L-serine , CysB , CysB-N-acetyl-L-serine , CysB-Sulphide , CysB-Thiosulfate

Coregulator(s):

ArcA, Cbl, CpxR, CysB, FNR, H-NS, IHF, NtrC, PhoP

Summary:

TF Summary ...[more]

TRANSCRIPTION FACTOR:

Name:

Cbl	Tractordb tool

Connectivity class

Local Regulator

Sensing Class

Using internal synthesized signals

Synonym(s):

DNA-binding transcriptional activator Cbl

Gene name(s):

cbl

Functional conformation(s):

Cbl-adenosine 5'-phosphosulfate , Cbl-Thiosulphate , Cbl

Coregulator(s):

Cbl, CysB, FNR, IHF

Summary:

TF Summary ...[more]

REGULATION EXERTED BY Cbl,CysB

Info M3D | Colombos

KNOWN BINDING SITES (The central relative position is relative to the promoter +1)
Cbl activator CysB activator
Transcription Factor		Regulated		Binding Sites				Evidence	References
Functional conformation	Function	Promoter	Gene(s)	LeftPos	RigthPos	Central Rel-Pos	Sequence
Cbl	activator	tauAp	tauA , tauB , tauC , tauD	385094	385133	-91.0	gttagaacggAGTAATTGCATATTTAATCTTTCCTTAGCCGTTTTTTTGCtaagaataaa	[GEA]	[1]
CysB-O-acetyl-L-serine	activator	tauAp	tauA , tauB , tauC , tauD	385146	385187	-38.0	agaataaaatCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTAttcctgaata	[GEA]	[1]
CysB-O-acetyl-L-serine	activator	tauAp	tauA , tauB , tauC , tauD	385091	385132	-93.0	attgttagaaCGGAGTAATTGCATATTTAATCTTTCCTTAGCCGTTTTTTTGctaagaataa	[GEA]	[1]
CysB-O-acetyl-L-serine	activator	tauAp	tauA , tauB , tauC , tauD	384982	385023	-202.0	aatataatagTTTTATTATATGTATTGATATTGATAGAAATAATGAAGTAATaaatctcgta	[GEA]	[1]

Evidence:	[GEA] Gene expression analysis
Reference(s):	[1] van der Ploeg JR., et al., 1997