RegulonDB

TRANSCRIPTION FACTOR:

Name:

PspF	Tractordb tool

Connectivity class

Local Regulator

Synonym(s):

DNA-binding transcriptional dual regulator PspF, YcjB

Gene name(s):

pspF

Functional conformation(s):

PspF , PspF

Coregulator(s):

IHF, PspF

Summary:

TF Summary ...[more]

REGULATION EXERTED BY PspF

Info M3D | Colombos

KNOWN BINDING SITES (The central relative position is relative to the promoter +1)
PspF repressor
Transcription Factor		Regulated		Binding Sites				Evidence	References
Functional conformation	Function	Promoter	Gene(s)	LeftPos	RigthPos	Central Rel-Pos	Sequence
PspF	repressor	pspFp1	pspF	1367931	1367947	7.0	ccaggatgagTTAGCGAATTACACTAAcaagtggcga	[EXP-IEP-GENE-EXPRESSION-ANALYSIS]	[1] [2]
PspF	repressor	pspFp1	pspF	1367911	1367927	27.0	acactaacaaGTGGCGAATTTCATCATggcagaatac	[EXP-IEP-GENE-EXPRESSION-ANALYSIS]	[1] [2]

Evidence:	[EXP-IEP-GENE-EXPRESSION-ANALYSIS] Gene expression analysis
Reference(s):	[1] Engl C., et al., 2020 [2] Jovanovic G., et al., 1997

Reference(s)
[1] Engl C., Jovanovic G., Brackston RD., Kotta-Loizou I., Buck M., 2020, The route to transcription initiation determines the mode of transcriptional bursting in E. coli., Nat Commun 11(1):2422
[2] Jovanovic G., Dworkin J., Model P., 1997, Autogenous control of PspF, a constitutively active enhancer-binding protein of Escherichia coli., J Bacteriol 179(16):5232-7