RegulonDB RegulonDB 10.9:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 32 gene(s)


  Gene name Product Operon Gene regulation GOs list
  cyoA cytochrome bo terminal oxidase subunit II cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoB cytochrome bo terminal oxidase subunit I cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoC cytochrome bo terminal oxidase subunit III cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoD cytochrome bo terminal oxidase subunit IV cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoE heme O synthase cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  fabZ 3-hydroxy-acyl-[acyl-carrier-protein] dehydratase bamA-skp-lpxD-fabZ-lpxAB-rnhB-dnaE CpxR , GadE view
  fliC flagellar biosynthesis; flagellin, filament structural protein fliC GadE , MatA view
  gadB glutamate decarboxylase B subunit gadBC AdiY , CRP , Fis , FliZ , GadE , GadW , GadX , RcsB view
  gadC glutamic acid:4-aminobutyrate antiporter gadBC AdiY , CRP , Fis , FliZ , GadE , GadW , GadX , RcsB view
  gadE GadE DNA-binding transcriptional activator gadEF-mdtEF ArcA , CRP , EvgA , FliZ , GadE , GadW , GadX , PhoP , YdeO view
  gadF small regulatory RNA GadF gadEF-mdtEF ArcA , CRP , EvgA , FliZ , GadE , GadW , GadX , PhoP , YdeO nd
  gadW GadW DNA-binding transcriptional dual regulator gadAXW FNR , GadE , GadW , GadX , PhoB , PhoP , RutR , SdiA , YdeO view
  gadX GadX DNA-binding transcriptional dual regulator gadAXW AdiY , ArcA , CRP , FNR , Fis , GadE , GadW , GadX , PhoB , RcsB , RutR , TorR view
  gltB glutamate synthase, large subunit gltBDF AdiY , ArgR , CRP , FNR , Fur , GadE , HdfR , IHF , Lrp , Nac view
  gltD glutamate synthase, small subunit gltBDF AdiY , ArgR , CRP , FNR , Fur , GadE , HdfR , IHF , Lrp , Nac view
  gltF periplasmic protein gltBDF AdiY , ArgR , CRP , FNR , Fur , GadE , HdfR , IHF , Lrp , Nac view
  gnd 6-phosphogluconate dehydrogenase, decarboxylating gnd FNR , Fur , GadE view
  hdeA HdeA monomer, chaperone active form hdeAB-yhiD FliZ , GadE , GadW , GadX , Lrp , MarA , PhoP , RcsB , TorR view
  hdeB HdeB monomer hdeAB-yhiD FliZ , GadE , GadW , GadX , Lrp , MarA , PhoP , RcsB , TorR view
  hdeD acid-resistance membrane protein hdeD GadE , GadX , PhoP , RcsB view
  lpxA UDP-N-acetylglucosamine acyltransferase bamA-skp-lpxD-fabZ-lpxAB-rnhB-dnaE CpxR , GadE view
  lpxD UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase bamA-skp-lpxD-fabZ-lpxAB-rnhB-dnaE CpxR , GadE view
  lrp Lrp transcriptional dual regulator lrp GadE , Lrp , NsrR view
  mdtE MdtEF-TolC multidrug efflux pump - membrane fusion protein gadEF-mdtEF CRP , EvgA , FliZ , GadE , GadW , GadX , YdeO view
  mdtF MdtEF-TolC multidrug efflux pump - permease subunit gadEF-mdtEF CRP , EvgA , FliZ , GadE , GadW , GadX , YdeO view
  purA adenylosuccinate synthetase purA GadE , MarA , PurR view
  rcsA positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression rcsA GadE , RcsAB view
  skp periplasmic chaperone bamA-skp-lpxD-fabZ-lpxAB-rnhB-dnaE CpxR , GadE view
  yhiD inner membrane protein YhiD hdeAB-yhiD FliZ , GadE , GadW , GadX , Lrp , MarA , PhoP , RcsB , TorR view
  yhiM inner membrane protein with a role in acid resistance yhiM nd view
  yjbQ conserved protein yjbQR nd view
  yjbR conserved protein yjbQR nd view
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