RegulonDB RegulonDB 10.9:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 56 gene(s)


  Gene name Product Operon Gene regulation GOs list
  acrA AcrAB-TolC multidrug efflux pump - membrane fusion protein acrAB AcrR , EnvR , MarA , MprA , PhoP , Rob , SoxS view
  acrB AcrAB-TolC multidrug efflux pump - permease subunit acrAB AcrR , EnvR , MarA , MprA , PhoP , Rob , SoxS view
  argD N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase argD ArgR , PhoP view
  borD lipoprotein bor homolog from lambdoid prophage DLP12 borD PhoP view
  clpS specificity factor for ClpA-ClpP chaperone-protease complex clpS nd view
  cysB CysB transcriptional dual regulator cysB CysB , PhoP view
  dcuD putative transport protein, C4-dicarboxylate uptake C family dcuD IHF , PhoP view
  fadL long-chain fatty acid outer membrane porin; bacteriophage T2 receptor fadL ArcA , CRP , FadR , OmpR , PhoP view
  gadE GadE DNA-binding transcriptional activator gadEF-mdtEF ArcA , CRP , EvgA , FliZ , GadE , GadW , GadX , PhoP , YdeO view
  gadF small regulatory RNA GadF gadEF-mdtEF ArcA , CRP , EvgA , FliZ , GadE , GadW , GadX , PhoP , YdeO nd
  gadW GadW DNA-binding transcriptional dual regulator gadAXW FNR , GadE , GadW , GadX , PhoB , PhoP , RutR , SdiA , YdeO view
  glgA glycogen synthase glgBXCAP CRP , PhoP view
  glgB 1,4-α-glucan branching enzyme glgBXCAP PhoP view
  glgC glucose-1-phosphate adenylyltransferase glgBXCAP CRP , PhoP view
  glgP glycogen phosphorylase glgBXCAP CRP , PhoP view
  glgX limit dextrin α-1,6-glucohydrolase glgBXCAP PhoP view
  hdeA HdeA monomer, chaperone active form hdeAB-yhiD FliZ , GadE , GadW , GadX , Lrp , MarA , PhoP , RcsB , TorR view
  hdeB HdeB monomer hdeAB-yhiD FliZ , GadE , GadW , GadX , Lrp , MarA , PhoP , RcsB , TorR view
  hdeD acid-resistance membrane protein hdeD GadE , GadX , PhoP , RcsB view
  hemL glutamate-1-semialdehyde aminotransferase hemL PdhR , PhoP view
  iraM anti-adaptor protein IraM, inhibitor of σS proteolysis iraM ArcA , FNR , PhoP view
  malS α-amylase malS CRP , MalT , PhoP view
  metB O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase metBL HypT , MetJ , PhoP view
  metL aspartate kinase / homoserine dehydrogenase metBL HypT , MetJ , PhoP view
  mgrB negative feedback regulator of the PhoQP system mgrB PhoP view
  mgrR MgrR mgrR PhoP view
  mgtA Mg2+ / Ni2+ transporting ATPase mgtLA PhoP view
  mgtL predicted leader peptide mgtLA PhoP view
  yneM small membrane protein yneM PhoP view
  nagA N-acetylglucosamine-6-phosphate deacetylase nagBAC-umpH CRP , NagC , PhoP view
  ompT outer membrane protease VII (outer membrane protein 3b) envY-ompT PhoP view
  pagP palmitoyl transferase for Lipid A pagP PhoP view
  phoP PhoP DNA-binding transcriptional dual regulator phoPQ PhoP view
  phoQ PhoQ sensory histidine kinase phoPQ PhoB , PhoP view
  purD phosphoribosylamine-glycine ligase purHD PhoP , PurR , RbsR view
  purH AICAR transformylase/IMP cyclohydrolase purHD PhoP , PurR , RbsR view
  rstA RstA transcriptional regulator rstAB PhoP view
  rstB RstB sensory histidine kinase rstAB PhoP view
  rutA pyrimidine oxygenase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutB peroxyureidoacrylate / ureidoacrylate amido hydrolase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutC predicted aminoacrylate peracid reductase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutD predicted aminoacrylate hydrolase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutE predicted malonic semialdehyde reductase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutF flavin reductase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutG uracil:H+ symporter RutG rutABCDEFG ArcA , NtrC , PhoP , RutR view
  safA two-component system connector protein safA-ydeO EvgA , PhoP , RcsB , YdeO view
  slyB outer membrane lipoprotein slyB PhoP view
  tolC TolC outer membrane channel tolC-ygiABC MarA , PhoP , Rob , SoxS view
  treR TreR DNA-binding transcriptional repressor treR PhoP view
  ybjG undecaprenyl pyrophosphate phosphatase ybjG PhoP view
  ydeO YdeO DNA-binding transcriptional dual regulator safA-ydeO EvgA , PhoP , RcsB , YdeO view
  ydeP acid resistance protein ydeP EvgA , NagC , NarL , NarP , PhoP , RcsB , UvrY view
  ygiB conserved outer membrane protein tolC-ygiABC MarA , PhoP , Rob , SoxS view
  ygiC predicted enzyme with ATPase activity tolC-ygiABC MarA , PhoP , Rob , SoxS view
  yhiD inner membrane protein YhiD hdeAB-yhiD FliZ , GadE , GadW , GadX , Lrp , MarA , PhoP , RcsB , TorR view
  yrbL putative protein yrbL BasR , PhoP view
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