RegulonDB RegulonDB 10.10:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 49 gene(s)


  Gene name Product Operon Gene regulation GOs list
  amtB ammonia / ammonium transporter glnK-amtB FNR , Fur , GadX , NtrC view
  argT lysine / arginine / ornithine ABC transporter - periplasmic binding protein argT-hisJQMP NtrC view
  astA arginine succinyltransferase astCADBE ArgR , NtrC view
  astB succinylarginine dihydrolase astCADBE ArgR , NtrC view
  astC succinylornithine transaminase astCADBE ArgR , NtrC view
  astD aldehyde dehydrogenase astCADBE ArgR , NtrC view
  astE succinylglutamate desuccinylase astCADBE ArgR , NtrC view
  cbl Cbl DNA-binding transcriptional activator cbl CysB , NtrC view
  ddpA YddS ddpXABCDF NtrC view
  ddpB YddR ddpXABCDF NtrC view
  ddpC YddQ ddpXABCDF NtrC view
  ddpD YddP ddpXABCDF NtrC view
  ddpF YddO ddpXABCDF NtrC view
  ddpX D-Ala-D-Ala dipeptidase ddpXABCDF NtrC view
  glnA glutamine synthetase glnALG CRP , Fis , NtrC view
  glnG NtrC transcriptional dual regulator glnALG CRP , Fis , NtrC view
  glnH L-glutamine ABC transporter - periplasmic binding protein glnHPQ IHF , NtrC view
  glnK nitrogen regulatory protein GlnK glnK-amtB FNR , Fur , GadX , NtrC view
  glnL NtrB glnALG CRP , Fis , NtrC view
  glnP L-glutamine ABC transporter - membrane subunit glnHPQ IHF , NtrC view
  glnQ L-glutamine ABC transporter - ATP binding subunit glnHPQ Fis , IHF , NtrC view
  hisJ histidine ABC transporter - periplasmic binding protein argT-hisJQMP ArgR , NtrC view
  hisM lysine/arginine/ornithine ABC transporter / histidine ABC transporter - membrane subunit argT-hisJQMP ArgR , NtrC view
  hisP lysine/arginine/ornithine ABC transporter / histidine ABC transporter - ATP binding subunit argT-hisJQMP ArgR , NtrC view
  hisQ lysine/arginine/ornithine ABC transporter / histidine ABC transporter - membrane subunit argT-hisJQMP ArgR , NtrC view
  nac Nac DNA-binding transcriptional dual regulator nac FNR , Fur , Nac , NtrC view
  patA putrescine aminotransferase patA Fis , IHF , NtrC view
  potF putrescine ABC transporter - periplasmic binding protein potFGHI NtrC view
  potG putrescine ABC transporter - ATP binding subunit potFGHI NtrC view
  potH putrescine ABC transporter - membrane subunit potFGHI NtrC view
  potI putrescine ABC transporter - membrane subunit potFGHI NtrC view
  relA GDP pyrophosphokinase/GTP pyrophosphokinase relA-mazEFG CRP , HipAB , HipB , NtrC view
  rpoE RNA polymerase, sigma 24 (sigma E) factor rpoE-rseABC CRP , CpxR , GlrR , IHF , NtrC , RcsB view
  rseA anti-sigma factor rpoE-rseABC CRP , CpxR , GlrR , IHF , NtrC , RcsB view
  rseB rseB rpoE-rseABC CRP , CpxR , GlrR , IHF , NtrC , RcsB view
  rseC protein RseC rpoE-rseABC CRP , CpxR , GlrR , IHF , NtrC , RcsB view
  rutA pyrimidine oxygenase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutB peroxyureidoacrylate / ureidoacrylate amido hydrolase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutC predicted aminoacrylate peracid reductase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutD predicted aminoacrylate hydrolase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutE predicted malonic semialdehyde reductase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutF flavin reductase rutABCDEFG ArcA , NtrC , PhoP , RutR view
  rutG uracil:H+ symporter RutG rutABCDEFG ArcA , NtrC , PhoP , RutR view
  yeaG protein kinase yeaGH NtrC view
  yeaH conserved protein yeaGH NtrC view
  yhdW putative transport protein, ABC superfamily - membrane component yhdWXYZ NtrC view
  yhdX putative transport protein, ABC superfamily - ATP-binding component yhdWXYZ NtrC view
  yhdY putative transport protein, ABC superfamily - membrane component yhdWXYZ NtrC view
  yhdZ putative transport protein, ABC superfamily - periplasmic binding protein yhdWXYZ NtrC view
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