RegulonDB RegulonDB 10.9:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 32 gene(s)


  Gene name Product Operon Gene regulation GOs list
  erpA essential respiratory protein A erpA IscR view
  hyaA hydrogenase 1, small subunit hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaB hydrogenase 1, large subunit hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaC hydrogenase 1, b-type cytochrome subunit hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaD protein involved in processing of HyaA and HyaB proteins hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaE protein involved in quality control of HyaA hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaF protein involved in nickel incorporation into hydrogenase 1 proteins hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  iscA iron-sulfur cluster assembly protein iscRSUA IscR view
  iscR IscR DNA-binding transcriptional dual regulator iscRSUA IscR view
  iscS cysteine desulfurase iscRSUA IscR view
  iscU scaffold protein for iron-sulfur cluster assembly iscRSUA IscR view
  napA large subunit of periplasmic nitrate reductase, molybdoprotein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napB subunit of periplasmic nitrate reductase, cytochrome c550 protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napC periplasmic nitrate reductase, cytochrome c protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napD signal peptide-binding chaperone for NapA napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napF ferredoxin-type protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napG ferredoxin-type protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napH ferredoxin-type protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  nfuA iron-sulfur cluster scaffold protein gntX-nfuA CRP , GntR , IscR view
  nrdE ribonucleoside-diphosphate reductase 2, α subunit nrdHIEF Fur , IscR , NrdR view
  nrdF ribonucleoside-diphosphate reductase 2, β subunit nrdHIEF Fur , IscR , NrdR view
  nrdH glutaredoxin-like protein nrdHIEF Fur , IscR , NrdR view
  nrdI flavodoxin involved in dimanganese-tyrosyl radical cofactor maintenance for ribonucleotide reductase nrdHIEF Fur , IscR , NrdR view
  rnlA CP4-57 prophage; RNase LS, toxin of the RnlAB toxin-antitoxin system rnlAB IscR view
  rnlB CP4-57 prophage; antitoxin of the RnlA-RnlB toxin-antitoxin system rnlAB IscR view
  sufA Fe-S transport protein in Fe-S cluster assembly sufABCDSE Fur , IHF , IscR , NsrR , OxyR view
  sufB SufB component of SufBCD Fe-S cluster scaffold complex sufABCDSE Fur , IHF , IscR , NsrR , OxyR view
  sufC SufC component of SufBCD Fe-S cluster scaffold complex sufABCDSE Fur , IHF , IscR , NsrR , OxyR view
  sufD SufD component of SufBCD Fe-S cluster scaffold complex sufABCDSE Fur , IHF , IscR , NsrR , OxyR view
  sufE sulfur acceptor for SufS cysteine desulfurase sufABCDSE Fur , IHF , IscR , NsrR , OxyR view
  sufS L-cysteine desulfurase sufABCDSE Fur , IHF , IscR , NsrR , OxyR view
  ydiU conserved protein ydiU IscR view
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