RegulonDB RegulonDB 10.8: Sigmulon Form
   

Sigma38 Sigmulon in Escherichia coli K-12 genome




Sigma38 Signal transduction, see details.




Sigma Factor      
Name: Sigma38      Signal transduction
Synonyms: RpoS
Gene name: rpoS
Sigmulon regulators:
Sigmulon Genes:


Transcribed promoters    
  Promoter Name TSS Position Transcribed Gene(s) Distance from TSS
to gene		 Promoter Sequence Box
(-10) 		Box
(-35) 		Evidence Code(s) Reference(s)
  aceEp 122969 aceE, aceF 48 aaagcgcggcaactaaacgtagaacctgtcttattgagctttccggcgagagttcaatggGacaggttccagaaaactcaa
                          -35              -10              +1                    		CCGGCGAGAGT CTGTCT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[1]
[2]
[3]
  aceEp 122969 aceE, aceF 48 aaagcgcggcaactaaacgtagaacctgtcttattgagctttccggcgagagttcaatggGacaggttccagaaaactcaa
                          -35                   -10         +1                    		GAGAGT CTGTCT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[1]
[2]
[3]
  acnAp1 1335424 ymiC, acnA 148 aatgttccgtcgttattccagacgactggcaactaacatcgcagcagcaagcctttatagAactgtttgctgaagatgatc
                          -35                    -10        +1                    		AAGCCT CTGGCA [HIPP]
[TIM] 		[4]
  acnAp1 1335424 ymiC, acnA 148 aatgttccgtcgttattccagacgactggcaactaacatcgcagcagcaagcctttatagAactgtttgctgaagatgatc
                          -35               -10             +1                    		GCAGCAAGCCT CTGGCA [HIPP]
[TIM] 		[4]
  acsp2 4287391 actP, yjcH, acs 20 atactaaacaaaactgccaatacccctacatttaacgcttatgccacatattattaacatCctacaaggagaacaaaagca
                               -35              -10         +1                    		ATATTATT TTTAACGCT [AIPP]
[HTIM] 		[5]
[6]
[1]
  adap 2310427 alkB, ada 22 aaaaattaaagcgcaagattgttggtttttgcgtgatggtgaccgggcagcctaaaggctAtccttaaccagggagctgat
                             -35                -10         +1                    		CAGCCTAAAGG TTGCGT [TIM] [7]
  adap 2310427 alkB, ada 22 aaaaattaaagcgcaagattgttggtttttgcgtgatggtgaccgggcagcctaaaggctAtccttaaccagggagctgat
                             -35                     -10    +1                    		TAAAGG TTGCGT [TIM] [7]
  adhEp1 1298413 adhE 292 ttgttatctagttgtgcaaaacatgctaatgtagccaccaaatcatactacaatttattaActgttagctataatggcgaa
                         -35                -10             +1                    		CATACTACAAT GCTAAT [IMP]
[TIM] 		[8]
[9]
  adhEp1 1298413 adhE 292 ttgttatctagttgtgcaaaacatgctaatgtagccaccaaatcatactacaatttattaActgttagctataatggcgaa
                       -35                       -10        +1                    		TACAAT ATGCTA [IMP]
[TIM] 		[8]
[9]
  adhEp2 1298309 adhE 188 tttgcaaaaatttgatttggatcacgtaatcagtacccagaagtgagtaatcttgcttacGccacctggaagtgacgcatt
                       -35                 -10              +1                    		GTGAGTAATCT CACGTA [HIPP]
[TIM] 		[8]
[9]
  adrAp 403687 dgcC 16 tacgaaaatggctcacccgaaatatcatacttctgcctttagctccgtctctataatttgGgaaaattgtttctgaatgtt
                               -35             -10          +1                    		GTCTCTATAAT TTCTGC [HIPP]
[TIM] 		[10]
[11]
  aidBp 4414247 aidB 28 gataagaatgttttagcaatctctttctgtcatgaatccatggcagtgaccatactaatgGtgactgccattgatggaggg
                        -35                        -10      +1                    		CATACT TTTCTG [TIM] [12]
[13]
[14]
[15]
[16]
  aidBp 4414247 aidB 28 gataagaatgttttagcaatctctttctgtcatgaatccatggcagtgaccatactaatgGtgactgccattgatggaggg
                             -35              -10           +1                    		GTGACCATACT GTCATG [TIM] [12]
[13]
[14]
[15]
[16]
  aldBp 3756535 aldB 24 gctgtcgtaaagctgttaccgactggcgaagatttcgccagtcacgtctacccttgttatAcctcacaccgcaaggagacg
                          -35               -10             +1                    		ACGTCTACCCT GCGAAG [TIM] [17]
  alkAp 2147559 alkA 19 tcgcgacaaccggaatatgaaagcaaagcgcagcgtctgaataacgtttatgctgaaagcGgatgaataaggagatgcgat
                           -35              -10             +1                    		ACGTTTATGCT AGCGCA [CV(RPF/RS-EPT-CBR)]
[CV(RPF/TA)]
[CV(RS-EPT-CBR/TA)]
[RPF]
[RS-EPT-CBR] 		[18]
[19]
[2]
  alkAp 2147559 alkA 19 tcgcgacaaccggaatatgaaagcaaagcgcagcgtctgaataacgtttatgctgaaagcGgatgaataaggagatgcgat
                      -35                        -10        +1                    		TATGCT AGCAAA [CV(RPF/RS-EPT-CBR)]
[CV(RPF/TA)]
[CV(RS-EPT-CBR/TA)]
[RPF]
[RS-EPT-CBR] 		[18]
[19]
[2]
  ansPp1 1526011 ansP 31 gaataatggtgataactatcatcgccaggatgaataaacattgttcatggcaacttatatGactttttcattaaagcaatc
                              -35              -10          +1                    		ATGGCAACTTA ATGAAT [TIM] [20]
  ansPp2 1526020 ansP 40 acccataaagaataatggtgataactatcatcgccaggatgaataaacattgttcatggcAacttatatgactttttcatt
                               -35                -10       +1                    		TTGTTCATGGC TCGCCA [TIM] [20]
  appCp 1037710 appC, appB, appX, appA 30 ggcgaatacctctggtcgtagagtttcaggataaagagggagatctaccattatcgggttAtttttctctcttcgcctaca
                        -35              -10                +1                    		AGATCTACCAT TTTCAG [HIPP] [21]
[22]
[23]
  appCp 1037710 appC, appB, appX, appA 30 ggcgaatacctctggtcgtagagtttcaggataaagagggagatctaccattatcgggttAtttttctctcttcgcctaca
                        -35                   -10           +1                    		TACCAT TTTCAG [HIPP] [21]
[22]
[23]
  appYp2 583656 appY 25 gcacatcatcctgattatgattgtgtatttaattggttgttatttgactactatcaacttGttttaattttatgataggtg
                                             -10            +1                    		TGACTACTATC   [HTIM] [15]
  araFp 1986238 araH, araG, araF 110 aattctgcgatgtgatattgctctcctatggagaattaatttctcgctaaaactatgtcaAcacagtcacttatcttttag
                       -35                 -10              +1                    		CTCGCTAAAAC CTCCTA [TIM] [24]
[15]
  araFp 1986238 araH, araG, araF 110 aattctgcgatgtgatattgctctcctatggagaattaatttctcgctaaaactatgtcaAcacagtcacttatcttttag
                             -35                      -10   +1                    		TATGTC TGGAGA [TIM] [24]
[15]
  araFp2 1986148 araH, araG, araF 20 aatgctttgttttccgattaatttaacgaatgtcattcgtttttgccctacacaaaacgaCactaaagctggagagaacca
                                          -10               +1                    		TTTGCCC   [HTIM] [15]
  arrSp 3658054 arrS 0 caagaataagttatcaataaccagtttgtgatctctgaagaatattactaaagttaaaatGtaatccgatttaaatatcga
                          -35               -10             +1                    		ATTACTAAAGT TTGTGA [HIPP] [25]
  arrSp 3658054 arrS 0 caagaataagttatcaataaccagtttgtgatctctgaagaatattactaaagttaaaatGtaatccgatttaaatatcga
                               -35                     -10  +1                    		TAAAAT ATCTCT [HIPP] [25]
  artPp1 903815 artM, artQ, artI, artP 81 ccgcccccgttattttgtgctatgtttattgaataatgcgctttgcttttaacttttaaaGcagaaatattgcataattat
                             -35              -10           +1                    		CTTTTAACTTT TTGAAT [TIM] [20]
  artPp2 903836 artM, artQ, artI, artP 102 gacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaataatgcGctttgcttttaacttttaaa
                           -35             -10              +1                    		ATGTTTATTGA CCCGTT [TIM] [20]
  artPp3 903843 artM, artQ, artI, artP 109 gaatgccgacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaAtaatgcgctttgcttttaac
                          -35               -10             +1                    		TGTGCTATGTT CCACCG [TIM] [20]
  asrp 1671327 asr 49 gttacacgctgaaaccaaccactcacggaagtctgccattcccagggatatagttatttcAacggccccgcagtggggtta
                                 -35              -10       +1                    		ATAGTTATTTC CTGCCA [IMP]
[TIM] 		[26]
[27]
  asrp 1671327 asr 49 gttacacgctgaaaccaaccactcacggaagtctgccattcccagggatatagttatttcAacggccccgcagtggggtta
                      -35                        -10        +1                    		TATAGT CTCACG [IMP]
[TIM] 		[26]
[27]
  astCp3 1832039 astE, astB, astD, astA, astC 57 tccgccgtttatgcacttttatcactggctggcacgaaccctgcaatctacatttacagcGcaaacattacttattattaa
                         -35                -10             +1                    		CAATCTACATT CTGGCT [CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(TA/TIM)]
[HIPP]
[RPF]
[TIM] 		[28]
[29]
  blcp 4377745 blc 23 catcgggtccgaattttcggaccttttctccgcttttccttgctgtcatctacacttagaAaaaaaccagtaaggaaacat
                             -35              -10           +1                    		TCATCTACACT TCCGCT [TIM] [30]
  blrp 1704512 blr 39 atcgcaaaaacctcagtaaaaatcttgctggagctattattgctaagtaacatttaccccCtgaagttaatggatcaatca
 		    [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[2]
[31]
[32]
  bolAp1 454434 bolA 38 aacctaaatatttgttgttaagctgcaatggaaacggtaaaagcggctagtatttaaaggGatggatgacatctcagcgtt
                       -35                 -10              +1                    		GCGGCTAGTAT CTGCAA [AIPP]
[CV(RPF/RS-EPT-CBR)]
[CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RPF]
[RS-EPT-CBR]
[TIM] 		[33]
[34]
[35]
[36]
[2]
[37]
  bolAp1 454434 bolA 38 aacctaaatatttgttgttaagctgcaatggaaacggtaaaagcggctagtatttaaaggGatggatgacatctcagcgtt
                       -35                      -10         +1                    		TAGTAT CTGCAA [AIPP]
[CV(RPF/RS-EPT-CBR)]
[CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RPF]
[RS-EPT-CBR]
[TIM] 		[33]
[34]
[35]
[36]
[2]
[37]
  bsmAp 4416869 bsmA 99 atgacatgaagaaatccttagcacaagtttctgctggcggtattagttcataatgttgagAtgtgggttacgctttcgtca
                                                 -10        +1                    		CATAAT   [NAS] [38]
  cbpAp2 1063828 cbpM, cbpA 53 tttcaataacatattctgtgttggcatatgaaattttgaggattaccctacacttataggAgttaccttacaggggttcct
                            -35             -10             +1                    		TACCCTACACT ATGAAA [CV(RPF/RS-EPT-CBR)]
[CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RPF]
[RS-EPT-CBR]
[TIM] 		[2]
[39]
[40]
  cbpAp6 1064037 cbpM, cbpA 262 ttccaggcctgtttcaaataattatttgcagtgcaactaattccatgtatattactacccAtatatagcgtctataaaatt
                         -35                    -10         +1                    		TATATT TTTGCA [TIM] [41]
  cfap1 1741201 cfa 212 tacttaggctgctaacaaaattttgttgtatgattgaaattagcggcctatactaatttcGagttgttaaagctacgataa
                         -35                -10             +1                    		CGGCCTATACT GTTGTA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[35]
[2]
[42]
  cfap1 1741201 cfa 212 tacttaggctgctaacaaaattttgttgtatgattgaaattagcggcctatactaatttcGagttgttaaagctacgataa
                          -35                    -10        +1                    		TATACT TTGTAT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[35]
[2]
[42]
  cfap2 1741379 cfa 34 agactcgcggttttttctgcgagatttctcacaaagcccaaaaagcgtctacgctgttttAaggttctgatcaccgaccag
                            -35              -10            +1                    		GCGTCTACGCT CTCACA [HIPP]
[TIM] 		[42]
  cpxRp 4105686 cpxA, cpxR 16 gggggtgtaaaacaacgtaaagtcatggattagcgacgtctgatgacgtaatttctgcctCggaggtatttaaacaatgaa
                         -35                     -10        +1                    		TAATTT ATGGAT [HIPP] [43]
  crrpI 2535610 crr 224 aggcaaatggactggcatgtgtggtgagcttgctggcgatgaacgtgctacacttctgttGctggggatgggtctggacga
 		    [TIM] [44]
  csgBp 1103859 csgB, csgA, csgC 92 aagaaaaatacaacgcgcgggtgagttattaaaaatatttccgcagacatactttccatcGtaacgcagcgttaacaaaat
                          -35                   -10         +1                    		CATACTT TTATTA [CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(TA/TIM)]
[RPF]
[TIM] 		[45]
[46]
  csgBp 1103859 csgB, csgA, csgC 92 aagaaaaatacaacgcgcgggtgagttattaaaaatatttccgcagacatactttccatcGtaacgcagcgttaacaaaat
                             -35                -10         +1                    		CATACTTTCCA TTAAAA [CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(TA/TIM)]
[RPF]
[TIM] 		[45]
[46]
  csgBp 1103859 csgB, csgA, csgC 92 aagaaaaatacaacgcgcgggtgagttattaaaaatatttccgcagacatactttccatcGtaacgcagcgttaacaaaat
                             -35                  -10       +1                    		TACTTT TTAAAA [CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(TA/TIM)]
[RPF]
[TIM] 		[45]
[46]
  csgDp1 1103344 csgG, csgF, csgE, csgD 148 agttacatttagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatCagatgtaatccattagtttt
                            -35              -10            +1                    		ATGGCTAGATT TTGATT [TIM] [47]
[48]
  csgDp1 1103344 csgG, csgF, csgE, csgD 148 agttacatttagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatCagatgtaatccattagtttt
                            -35                   -10       +1                    		TAGATT TTGATT [TIM] [47]
[48]
  csgDp2 1103335 csgG, csgF, csgE, csgD 139 tagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatcagatgtaaTccattagttttatattttac
                        -35                     -10         +1                    		AAATCA TTAAGA [TIM] [48]
  csgDp2 1103335 csgG, csgF, csgE, csgD 139 tagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatcagatgtaaTccattagttttatattttac
                        -35                -10              +1                    		GATTGAAATCA TTAAGA [TIM] [48]
  csgDp2 1103335 csgG, csgF, csgE, csgD 139 tagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatcagatgtaaTccattagttttatattttac
                   -35                   -10                +1                    		TAGATTGAAATC TTGATT [TIM] [48]
  csiDp 2788927 glaH, lhgD, gabD, gabT, gabP 58 ataagaaaacaatatgtcgcttttgtgcgcatttttcagaaatgtagatatttttagattAtggctacgaaatgagcatcg
                                 -35              -10       +1                    		ATTTTTAGATT TTTTCA [TIM] [49]
[50]
  csiEp 2665401 csiE 34 cttgccaacatttctgatgattagcattcccttcgccatttccttgagcaaactttagctAttcttatcaattatgcttat
                           -35                     -10      +1                    		AACTTT TTCCCT [HIPP]
[TIM] 		[51]
  csiEp 2665401 csiE 34 cttgccaacatttctgatgattagcattcccttcgccatttccttgagcaaactttagctAttcttatcaattatgcttat
                           -35               -10            +1                    		TGAGCAAACTT TTCCCT [HIPP]
[TIM] 		[51]
  csrAp1 2819373 csrA 227 tacctgcagcgttagccagtgtgaaaggctgggtcagcgcgaaattgcaataatataagcGtcaggcaatgccgtggactc
                         -35                -10             +1                    		ATTGCAATAAT AAGGCT [HIPP]
[TIM] 		[52]
  csrAp1 2819373 csrA 227 tacctgcagcgttagccagtgtgaaaggctgggtcagcgcgaaattgcaataatataagcGtcaggcaatgccgtggactc
                             -35                   -10      +1                    		TAATAT CTGGGT [HIPP]
[TIM] 		[52]
  csrAp3 2819273 csrA 127 aacgctatcgacaacgataaagtcaggttgaagttgtgtatatcggctaaacttaggtttAacagaatgtaatgccatgac
                        -35                -10              +1                    		TCGGCTAAACT CAGGTT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[53]
[2]
[52]
  cyaRp 2167114 cyaR 0 tggaaaattcttagaaaccgatcacatacagctgcatttattaaggttatcatccgtttcGctgaaaaacataacccataa
                         -35               -10              +1                    		AAGGTTATCAT CATACA [AIPP]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[54]
[55]
[15]
[2]
  cyaRp 2167114 cyaR 0 tggaaaattcttagaaaccgatcacatacagctgcatttattaaggttatcatccgtttcGctgaaaaacataacccataa
                          -35                   -10         +1                    		TATCA ATACAG [AIPP]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[54]
[55]
[15]
[2]
  cyaRp 2167114 cyaR 0 tggaaaattcttagaaaccgatcacatacagctgcatttattaaggttatcatccgtttcGctgaaaaacataacccataa
                     -35                        -10         +1                    		TATCAT ATCACA [AIPP]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[54]
[55]
[15]
[2]
  ddpXp2 1563201 ddpF, ddpD, ddpC, ddpB, ddpA, ddpX 125 tacgattccgggagattccttccttaacttcccctcttgcaccaaaactgcactacgctgCacaaatgttgatcaaaagtt
                                                -10         +1                    		CTGCACT   [HIPP] [56]
  ddpXp3 1563249 ddpF, ddpD, ddpC, ddpB, ddpA, ddpX 173 gggttttcatttaacgtgacactgtcacttaaatactgtgatttcagctacgattccgggAgattccttccttaacttccc
                                                -10         +1                    		CTACGAT   [HIPP] [56]
  dhaKp 1250944 dhaM, dhaL, dhaK 106 aaagtttcaatatggaacattcattaaagcatatgtttcactatgaaacataatttgggcTaattttcttttcccttgcct
                    -35              -10                    +1                    		TTCACTATGAA TTCATT [AIPP] [53]
  dhaRp 1251003 dhaR 63 tagcccaaattatgtttcatagtgaaacatatgctttaatgaatgttccatattgaaactTttacgtgtattaatacttaa
                        -35                 -10             +1                    		TGTTCCATATT GAAACA [AIPP] [57]
  dinBp 250880 dinB, yafN, yafO, yafP 18 cgcgttaaatgctgaatctttacgcatttctcaaaccctgaaatcactgtatactttaccAgtgttgagaggtgagcaatg
                            -35              -10            +1                    		CACTGTATACT TTCTCA [AIPP] [58]
  dinBp 250880 dinB, yafN, yafO, yafP 18 cgcgttaaatgctgaatctttacgcatttctcaaaccctgaaatcactgtatactttaccAgtgttgagaggtgagcaatg
                            -35                   -10       +1                    		TATACT TTCTCA [AIPP] [58]
  dkgAp 3156571 dkgA 52 cccgctaagctttttacgcctcaaactttcgttttcgggcatttcgtccagacttaagttCacaacacctcaccggagcct
 		    [HTIM] [53]
  dkgBp 229098 dkgB 69 tttttttcgtctgtatatctattattgccagaatcgcaaaaatcctctgcattttacgctCtttttcctcaacagtctgaa
                                 -35              -10       +1                    		CATTTTACGCT ATCGCA [AIPP] [57]
  dnaNp1 3882733 recF, dnaN 412 aacgacattcgtttgccgggcgaagtggcgttctttatcgccaagcgtctacgatctaacGtacgtgagctggaaggggcg
                         -35                 -10            +1                    		GCGTCTACGAT GTGGCG [HIPP]
[TIM] 		[59]
[60]
  dnaNp1 3882733 recF, dnaN 412 aacgacattcgtttgccgggcgaagtggcgttctttatcgccaagcgtctacgatctaacGtacgtgagctggaaggggcg
                         -35                      -10       +1                    		TACGAT GTGGCG [HIPP]
[TIM] 		[59]
[60]
  dnaNp2 3882590 recF, dnaN 269 tgaggcgctgcgcgacttgctggcattgcaggaaaaactggtcaccatcgacaatattcaGaagacggtggcggagtacta
                          -35                        -10    +1                    		AATATT TTGCAG [HIPP]
[TIM] 		[59]
[60]
  dnaNp2 3882590 recF, dnaN 269 tgaggcgctgcgcgacttgctggcattgcaggaaaaactggtcaccatcgacaatattcaGaagacggtggcggagtacta
                          -35                -10            +1                    		CCATCGACAAT TTGCAG [HIPP]
[TIM] 		[59]
[60]
  dnaNp4 3882348 recF, dnaN 27 gccgtaagatcgagcagttgcgtgaagagagccacgatatcaaagaagatttttcaaattTaatcagaacattgtcatcgt
                      -35                       -10         +1                    		GATTTT GTGAAG [HIPP]
[TIM] 		[59]
[60]
  dnaNp4 3882348 recF, dnaN 27 gccgtaagatcgagcagttgcgtgaagagagccacgatatcaaagaagatttttcaaattTaatcagaacattgtcatcgt
                               -35                -10       +1                    		TTTTTCAAATT GCCACG [HIPP]
[TIM] 		[59]
[60]
  dpsp 848950 dps 39 attagtgtgataggaacagccagaatagcggaacacatagccggtgctatacttaatctcGttaattactgggacataaca
                          -35              -10              +1                    		GGTGCTATACT TAGCGG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[61]
[20]
[2]
  dpsp 848950 dps 39 attagtgtgataggaacagccagaatagcggaacacatagccggtgctatacttaatctcGttaattactgggacataaca
                         -35                    -10         +1                    		TATACT ATAGCG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[61]
[20]
[2]
  ecnBp 4376509 ecnB 44 ttctcttccgaaaaatcatcagattcccatcatttttggcgatgttgtctattattaattTgctataggcaaacataaata
                         -35                 -10            +1                    		TTGTCTATTAT TCCCAT [TIM] [62]
  elaBp 2381053 elaB 26 ttgggatggcacgcgaggtaattcaggcgtaatcaacaacccttgtctatagttagtgacAggttttacgcaaatggagaa
                      -35                     -10           +1                    		TCTATAGTTA TTCAGG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[ICA]
[IEP]
[RS-EPT-CBR]
[TIM] 		[63]
[64]
[2]
[65]
  enop4 2907968 eno 27 gtaaaaaagttagagcggcaacgcgtaccctgggtacgcgttgtttgtctggagtttcagTttaactagtgacttgaggaa
                                                 -10        +1                    		CTGGAGTT   [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[1]
[2]
  enop7 2908152 eno 211 tctgcgcgttgcgggccgttccggggatgatcagttggtcgagatcatcgaagttccgaaTcacccgtggttcgtggcttg
                                               -10          +1                    		ATCGAAGT   [HTIM] [1]
  epdp 3073823 fbaA, pgk, epd 132 aatgtcttcttcggctggacaaacattccttttattccacgtttcgcttatcctagctgaAgcgtttcagtcgattaaatg
                          -35                    -10        +1                    		TATCCT TTCCTT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[66]
[67]
[1]
[2]
  epdp 3073823 fbaA, pgk, epd 132 aatgtcttcttcggctggacaaacattccttttattccacgtttcgcttatcctagctgaAgcgtttcagtcgattaaatg
                          -35               -10             +1                    		TCGCTTATCCT TTCCTT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[66]
[67]
[1]
[2]
  evgAp1 2483641 evgA, evgS 114 tccctgattttattgttgacatttcatttatgccgactatttatatggtatacttgtcgaAttatcttaaaggaagctcag
                           -35              -10             +1                    		TATGGTATACT TTTATG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[2]
[68]
  fadLp 2461205 fadL 101 tttgaaaaaagatagaaacatacttgcaacattccagctggtccgacctatactctcgccActggtctgatttctaagatg
                        -35                 -10             +1                    		CGACCTATACT TTGCAA [HIPP]
[TIM] 		[69]
[70]
[35]
  fbaBp 2178667 fbaB 103 gcgctaacattttttctgatgaatcgagccaacagaaaacgctgaaaaaacatccaaaagAtggaaaaactcgcccgtaac
                                 -35              -10       +1                    		ACATCCAAAAG CAGAAA [AIPP]
[TIM] 		[20]
  frdAp 4382412 frdD, frdC, frdB, frdA 94 taaaaaaatcgatctcgtcaaatttcagacttatccatcagactatactgttgtacctatAaaggagcagtggaatagcgt
                       -35                  -10             +1                    		TATACT TTTCAG [TIM] [71]
  ftsQp1 102867 ftsQ, ftsA, ftsZ 288 tactcggtgaagaaattttaccgtcaatacgtattcaaccgtccggaaccttctatgattAtgaggcgaagtatctctctg
                                -35              -10        +1                    		CCTTCTATGAT TATTCA [HIPP]
[TIM] 		[72]
[73]
[74]
  ftsQp1 102867 ftsQ, ftsA, ftsZ 288 tactcggtgaagaaattttaccgtcaatacgtattcaaccgtccggaaccttctatgattAtgaggcgaagtatctctctg
                                 -35                  -10   +1                    		TATGAT ATTCAA [HIPP]
[TIM] 		[72]
[73]
[74]
  ftsQp2 102742 ftsQ 413 cagtgtgggaatgtcaaaagtagtagcagaaaatgctctacaagatgcattaagattggcAtttcagcacgatgaagaagt
                           -35                -10           +1                    		TGCATTAAGAT CAGAAA [HIPP]
[TIM] 		[72]
[73]
[75]
  fumCp 1686709 fumC 121 cagatacaactcacacaatgcacccgctgtgtgaaataaacagagccgcccttcggggcgGtttttttacatggcacgaaa
                               -35             -10          +1                    		CGCCCTTCGGG GTGAAA [TIM] [4]
[76]
  gabDp1 2791172 gabD, gabT, gabP 101 ggcagcgacatcagcaattcctattggtgcgcatattgtcagcaaggtacaaacgctgttGgcaagccagagtaaccccgg
                        -35                -10              +1                    		CAAGGTACAAA TTGGTG [HIPP]
[TIM] 		[77]
  gabDp1 2791172 gabD, gabT, gabP 101 ggcagcgacatcagcaattcctattggtgcgcatattgtcagcaaggtacaaacgctgttGgcaagccagagtaaccccgg
                        -35                     -10         +1                    		TACAAA TTGGTG [HIPP]
[TIM] 		[77]
  gabDp2 2790912 gabD, gabT, gabP 361 gagattttgggctcgtcggggattcgccgggtgctgcaaaaccatctacgctcaggactgGgcgagatgaaaaactcgctg
                        -35               -10               +1                    		CCATCTACGCT TCGCCG [HIPP]
[TIM] 		[50]
  gadAp 3667607 gadX, gadA 27 tatttaaattaagcctgtaatgccttgcttccattgcggataaatcctacttttttattgCcttcaaataaatttaaggag
                        -35                -10              +1                    		AATCCTACTTT CTTGCT [HIPP]
[TIM] 		[78]
[79]
[80]
  gadAp 3667607 gadX, gadA 27 tatttaaattaagcctgtaatgccttgcttccattgcggataaatcctacttttttattgCcttcaaataaatttaaggag
                         -35                    -10         +1                    		TACTTT TTGCTT [HIPP]
[TIM] 		[78]
[79]
[80]
  gadAp 3667607 gadX, gadA 27 tatttaaattaagcctgtaatgccttgcttccattgcggataaatcctacttttttattgCcttcaaataaatttaaggag
                         -35                    -10         +1                    		TACTTTTTT TTGCTT [HIPP]
[TIM] 		[78]
[79]
[80]
  gadBp 1572072 gadC, gadB 27 tatttaaacacgagtcctttgcacttgcttactttatcgataaatcctacttttttaatgCgatccaatcattttaaggag
                        -35                -10              +1                    		AATCCTACTTT CTTGCT [HIPP]
[TIM] 		[78]
[79]
[80]
  gadBp 1572072 gadC, gadB 27 tatttaaacacgagtcctttgcacttgcttactttatcgataaatcctacttttttaatgCgatccaatcattttaaggag
                         -35                    -10         +1                    		TACTTT TTGCTT [HIPP]
[TIM] 		[78]
[79]
[80]
  gadEp 3658345 gadE, gadF, mdtE, mdtF 21 atattgaacaacgattcggacaaggatgtaaataatgaaaaggatgacatattcgaaacgAtaacggctaaggagcaagtt
                                  -35             -10       +1                    		TATTCGAAACG AATGAA [TIM] [58]
[81]
  gadEp1 3658242 gadE, gadF 124 ttaggatcaatatatggagtgcgtgatggataaatctgaagtattgattagtgttaatagAcgtattagttcacgaagggt
                           -35              -10             +1                    		TTGATTAGTGT TGGATA [IEP]
[TIM] 		[82]
[83]
  gadXp 3665839 gadW, gadX 29 tttaaatttatttatcaatcaatttgacttaagagggcggcgtgctacattaataaacagTaatatgtttatgtaatatta
                        -35              -10                +1                    		CGTGCTACATT TTGACT [HIPP]
[TIM] 		[84]
  gadYp 3664864 gadY 0 atagcttatgtttataaaaaaatggctgatcttatttccagtaaaagttatatttaacttActgagagcacaaagtttccc
                          -35               -10             +1                    		AAAGTTATATT CTGATC [AIPP]
[IMP]
[TIM] 		[85]
  galEp1 792081 galM, galK, galT, galE 26 gattccactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcAtaccataagcctaatggagc
                    -35                     -10             +1                    		TATGCT ATGTCA [CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(TA/TIM)]
[RPF]
[TIM] 		[86]
[87]
[88]
[89]
  galEp1 792081 galM, galK, galT, galE 26 gattccactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcAtaccataagcctaatggagc
                            -35             -10             +1                    		TATGCTATGGT CTTTTC [CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(TA/TIM)]
[RPF]
[TIM] 		[86]
[87]
[88]
[89]
  gapAp1 1862735 gapA 36 gtcgcaatgattgacacgattccgcttgacgctgcgtaaggtttttgtaattttacaggcAaccttttattcactaacaaa
                          -35                    -10        +1                    		AATTTT TTGACG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[HTIM]
[IMP]
[RS-EPT-CBR]
[TIM] 		[67]
[90]
[1]
[2]
[91]
  gapAp1 1862735 gapA 36 gtcgcaatgattgacacgattccgcttgacgctgcgtaaggtttttgtaattttacaggcAaccttttattcactaacaaa
                          -35               -10             +1                    		TTTGTAATTTT TTGACG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[HTIM]
[IMP]
[RS-EPT-CBR]
[TIM] 		[67]
[90]
[1]
[2]
[91]
  glgCp3 3569571 glgP, glgA, glgC 243 tttggtggagaatcgctggtgggaagaaggcgacggcaatgtccgttggctaaatcgataTgctcaacctttaagcacgga
                           -35                -10           +1                    		TTGGCTAAATC AAGGCG [TIM] [92]
  glgSp1 3192012 glgS 73 ttcactaaaaagtgtgatcggggacaatatatttacgcacgttatgtttaaaggcactacActgattggggaatactgaaa
                  -35                 -10                   +1                    		CACGTTATGTT TCGGGG [HIPP]
[TIM] 		[93]
  glgSp2 3192002 glgS 63 agtgtgatcggggacaatatatttacgcacgttatgtttaaaggcactacactgattgggGaatactgaaatcagaaaaag
                        -35                -10              +1                    		GGCACTACACT TACGCA [TIM] [93]
  glkp 2509461 glk 35 ttacagggagcctgcctttccggcgttgttgttatgcccccaggtatttacagtgtgagaAagaattattttgactttagc
                                                -10         +1                    		TTACAGTG   [HIPP]
[HTIM] 		[94]
[1]
  glkp1 2509447 glk 21 cctttccggcgttgttgttatgcccccaggtatttacagtgtgagaaagaattattttgaCtttagcggagcagttgaaga
                                              -10           +1                    		AAAGAATT   [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[53]
[1]
[2]
  glsAp 511573 glsA, ybaT 68 ggattagacatttatctctttgttttcctgtagttaagttgcgggtgctaagttaaatcaGgatgcctgaaaatcggcacc
 		    [TIM] [95]
[31]
  gltBp 3354509 gltB, gltD, gltF 216 acatttctgtaccaataagcttgccatttgacctgtatcagctttcccgataagttggaaAtccgctggaagctttctgga
                            -35                    -10      +1                    		TAAGTT TTGACC [HIPP]
[TIM] 		[96]
[31]
[97]
  gorp 3646112 gor 187 aactggcggtactgccagacagcgatcgccgtggcatgaccgcttccggcatgattgtgaTtaacccgccgtggaaactgg
                         -35                      -10       +1                    		CATGAT ATCGCC [AIPP] [58]
  gpmAp 787632 gpmA 37 tattttcgctatggttatgcgtaagcattgctgttgcttcgtcgcggcaatataatgagaAttattatcattaaaagatga
                           -35                    -10       +1                    		ATATAATG ATTGCTGTT [AIPP]
[CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[1]
[2]
[98]
  gpmAp2 787670 gpmA 75 tgcaactcaatattcacaacaaccttacactgcgccactattttcgctatggttatgcgtAagcattgctgttgcttcgtc
                                               -10          +1                    		CTATGGTT   [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[1]
[2]
  gpmMp2 3785187 gpmM, envC, yibQ 73 gacgaaaaaaaagcgtaaatctggcatcggcttgccgcgagcggtcgtatattttgatctTcagaggctattttatcgatt
                                                -10         +1                    		TATATT   [HTIM] [15]
  gyrBp 3880150 gyrB 31 atagacatgtcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggatTaacccaagtataaatgagcg
                         -35               -10              +1                    		AAGGGTAAAAT AAGATG [HIPP]
[IMP]
[TIM] 		[99]
[100]
  gyrBp 3880150 gyrB 31 atagacatgtcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggatTaacccaagtataaatgagcg
                     -35                        -10         +1                    		TAAAAT TTCGAA [HIPP]
[IMP]
[TIM] 		[99]
[100]
  hchAp2 2035630 hchA 205 tccacagcactaaatctctccccgccaccccgtacctctgataatggtctaaaatcattgAagccacttgcgacgacgttg
                            -35              -10            +1                    		TGGTCTAAAAT CCCCGT [TIM] [101]
  hdeAp 3656791 yhiD, hdeB, hdeA 51 tctgattttgatattttccatcaacatgacatatacagaaaaccaggttataacctcagtGtcgaaattgattcgtgacgg
                     -35               -10                  +1                    		AAAACCAGGTT TCAACA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[45]
[102]
[79]
[2]
  hdeAp 3656791 yhiD, hdeB, hdeA 51 tctgattttgatattttccatcaacatgacatatacagaaaaccaggttataacctcagtGtcgaaattgattcgtgacgg
                          -35                    -10        +1                    		TATAAC ATGACA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[45]
[102]
[79]
[2]
  hdeAp 3656791 yhiD, hdeB, hdeA 51 tctgattttgatattttccatcaacatgacatatacagaaaaccaggttataacctcagtGtcgaaattgattcgtgacgg
                           -35                   -10        +1                    		TATAACCT TGACA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[45]
[102]
[79]
[2]
  hdeDp 3656960 hdeD 35 taggaaatttttattaaatcgactgcattcttagacgcgtttttggcatagattgatagcAggggattttcttcttaattt
                            -35                  -10        +1                    		TAGATT TTCTTA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[82]
[79]
[2]
[31]
  hdfRp 3948021 hdfR 54 cacgctcctaattctttgaccgagctagttatggcgcggagtattagttacgcttgacagAgtgtaaaacaaaacatttaa
                         -35                -10             +1                    		TTAGTTACGCT CTAGTT [IHBCE] [57]
  hmpp 2685797 hmp 38 tttctgaaaaacaccaaagaaccatttacattgcagggctattttttataagatgcatttGagatacatcaattaagatgc
                         -35              -10               +1                    		TTTTTTATAAG TTTACA [CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(TA/TIM)]
[HIPP]
[RPF]
[TIM] 		[103]
[104]
  hofMp 3522928 hofP, hofO, hofN, hofM 177 ttaatgtcgccacatccggcagttgtggctcgatgtagcggtataggccataaatcgagcCtgctcccagcagaatgcaac
                         -35                -10             +1                    		TAGGCCATAAA GTGGCT [AIPP] [57]
  hyaAp 1031984 hyaA, hyaB, hyaC, hyaD, hyaE, hyaF 155 aaaagataaatccacacagtttgtattgttttgtgcaaaagtttcactacgctttattaaCaatactttctggcgacgtgc
                     -35                        -10         +1                    		TACGCT TTGTAT [HIPP]
[IMP]
[TIM] 		[22]
[105]
  hyaAp 1031984 hyaA, hyaB, hyaC, hyaD, hyaE, hyaF 155 aaaagataaatccacacagtttgtattgttttgtgcaaaagtttcactacgctttattaaCaatactttctggcgacgtgc
                          -35              -10              +1                    		TTCACTACGCT TTGTTT [HIPP]
[IMP]
[TIM] 		[22]
[105]
  ihfAp4 1795721 ihfA 169 gatattttatccgaatgtaagaaagttggcgtaaatcaggtagttggcgtaaacttatttGacgtgtaccgcggtaagggt
                          -35                -10            +1                    		TGGCGTAAACT TTGGCG [HIPP]
[TIM] 		[106]
[107]
  ihfBp 963749 ihfB 79 tttattccgaagtttgttgagtttacttgacagattgcaggtttcgtcctgtaatcaagcActaagggcggctacggccgc
                           -35               -10            +1                    		CGTCCTGTAAT TTGACA [HIPP]
[TIM] 		[106]
[108]
  ilvYp 3957867 ilvY 47 gtttgcgagattgaattcactatatgacaggaaatttattgcggaaattgatatattcacAacgtcacattgcaatttttg
                             -35                    -10     +1                    		TATATT AGGAAA [HIPP]
[IEP]
[IMP]
[TIM] 		[109]
[110]
[111]
  ilvYp 3957867 ilvY 47 gtttgcgagattgaattcactatatgacaggaaatttattgcggaaattgatatattcacAacgtcacattgcaatttttg
                     -35               -10                  +1                    		TTGCGGAAATT TATATG [HIPP]
[IEP]
[IMP]
[TIM] 		[109]
[110]
[111]
  insC-5p 3186040 insC5, insCD5, insD5, yqiH, yqiI, yqiG 147 gttcgcccggccacatcattaacggattaatgataagtggatcagatgtataaaaaattaAaattaaccacaataagcgaa
                                                 -10        +1                    		TATAAA   [HTIM] [15]
  insN-1p 270226 insI1, insN 377 tttgctaagagcttcattcatgaatccttttcactagggatgaagtggtttactgaatttGgccacctgaacagaggtgat
                                              -10           +1                    		TGGTTTACT   [HTIM] [15]
  iraDp2 4556856 idlP, iraD 57 gacttttttcctgaaaagtcagtagatattcataggcaagtaaggttttatactttgctgAcaggattcaggcctgtctca
                         -35                -10             +1                    		GGTTTTATACT GATATT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[53]
[112]
[2]
  iraDp2 4556856 idlP, iraD 57 gacttttttcctgaaaagtcagtagatattcataggcaagtaaggttttatactttgctgAcaggattcaggcctgtctca
                            -35                  -10        +1                    		TATACT ATTCAT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[53]
[112]
[2]
  katEp 1813814 katE 53 aacaccgtttccagaatagtctccgaagcgggatctggctggtggtctatagttagagagTtttttgaccaaaacagcggc
                       -35                 -10              +1                    		TGGTCTATAGT CCGAAG [IMP]
[TIM] 		[113]
[114]
  kbpp4 2796814 kbp 28 attaaacctgtgctcatccccgcggcgttaacgcgccgcgttcctctgctacactttctgAgtgtttccgttaacgaatga
                                                -10         +1                    		GCTACACT   [ICWHO] [58]
  ldcCp null ldcC       [IMP]
[TAS] 		[115]
[116]
[117]
  lsrAp 1601460 lsrA, lsrC, lsrD, lsrB, lsrF, lsrG, tam 30 atatgtgcaatgtccacctaaggttatgaacaaattaaaagcagaaatacatttgttcaaAactcacctgcaaaactgaac
                          -35                 -10           +1                    		AATACATTTGT ATGAAC [AIPP] [57]
[118]
[119]
  luxSp1 2815065 luxS 332 tgcttcgataatcccgatctgactttctctgcccgtatcttaaggtctatgattgatactGgtattggcggaacaggcaaa
                          -35              -10              +1                    		AGGTCTATGAT TCTCTG [HIPP]
[TIM] 		[120]
  mdtAp 2153979 mdtA, mdtB, mdtC, mdtD, baeS, baeR 37 ccagacagtgtttcataattcctccatttttctcccttattggctggctacactagtatcAttccgcgaaacgtttcagga
                         -35                -10             +1                    		CTGGCTACACT CATTTT [AIPP] [57]
  metKp 3086577 metK 129 gattcaaaaaaaagtggaaatagggtgaagaattgacctaaaatagccatccagatgttaAtccatccataccgattaaca
                                 -35                  -10   +1                    		GATGTT TTGACC [HIPP]
[TIM] 		[31]
[121]
  mglBp 2240566 mglC, mglA, mglB 218 cgctttcaatctgtgagtgatttcacagtatcttaacaatgtgatagctatgattgcaccGttttaacgttgtaacccgta
                        -35                 -10             +1                    		ATAGCTATGAT CACAGT [HIPP]
[IMP] 		[122]
[123]
  mglBp 2240566 mglC, mglA, mglB 218 cgctttcaatctgtgagtgatttcacagtatcttaacaatgtgatagctatgattgcaccGttttaacgttgtaacccgta
                      -35                        -10        +1                    		TATGAT TTCACA [HIPP]
[IMP] 		[122]
[123]
  micFp 2313084 micF 0 aagtatttgacagcactgaatgtcaaaacaaaaccttcactcgcaactagaataactcccGctatcatcattaactttatt
                      -35                       -10         +1                    		TAGAAT GTCAAA [HIPP]
[TIM] 		[124]
[31]
  mlrAp 2214840 mlrA 26 tagatgcacaaaaaacgggcaaaactacctggttcgcaaaactgcgtctaaagttaaaccGggacctcgcgagcaagggtg
                          -35               -10             +1                    		GCGTCTAAAGT TACCTG [HIPP]
[TIM] 		[58]
[125]
  mlrAp 2214840 mlrA 26 tagatgcacaaaaaacgggcaaaactacctggttcgcaaaactgcgtctaaagttaaaccGggacctcgcgagcaagggtg
                         -35                     -10        +1                    		TAAAGT CTACCT [HIPP]
[TIM] 		[58]
[125]
  mnmGp 3925674 rsmG, mnmG 41 atacccaggatcccaggtctttctcaagccgacaaagttgagtagaatccacggcccgggCttcaatccattttcataccg
                     -35                   -10              +1                    		TAGAAT TTCTCA [TIM] [126]
  mplp1 4455728 mpl 57 ctcaatgttgcgctcaggtgaatcgcgccagcaaattacggattatcctgaaatgcgtttCtcacttgcccgacatatgcg
                       -35             -10                  +1                    		CGGATTATCCT TCGCGC [HIPP] [127]
  mplp1 4455728 mpl 57 ctcaatgttgcgctcaggtgaatcgcgccagcaaattacggattatcctgaaatgcgtttCtcacttgcccgacatatgcg
                  -35                       -10             +1                    		TATCCT GTGAAT [HIPP] [127]
  msyBp 1114213 msyB 32 atcgaactgatttttcgcctttcatacttgcaaaagcggagaatcagctatccttttcccTgaaacctcatcaactcaaag
                            -35             -10             +1                    		TCAGCTATCCT TTGCAA [TIM] [20]
  mtnp 179183 yadS, btuF, mtn 30 gtgccatgtcctctcccgcgtgagaaatacgcttccccgtaagcgcatggtaaactatgcCttcaaatcgggcttatcgcg
                            -35               -10           +1                    		CATGGTAAACT TACGCT [HIPP]
[TIM] 		[128]
  mtnp 179183 yadS, btuF, mtn 30 gtgccatgtcctctcccgcgtgagaaatacgcttccccgtaagcgcatggtaaactatgcCttcaaatcgggcttatcgcg
                           -35                     -10      +1                    		TAAACT ATACGC [HIPP]
[TIM] 		[128]
  murQp1 2545733 murQ, murP 40 tgcgagtgtagactcaatgattcctttaagcctgtcaattcgggatatatgattccatacAtctgcaattatttgatcgta
                          -35                 -10           +1                    		TATATGATTCC TTAAGC [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[129]
[2]
  murQp1 2545733 murQ, murP 40 tgcgagtgtagactcaatgattcctttaagcctgtcaattcgggatatatgattccatacAtctgcaattatttgatcgta
                         -35                    -10         +1                    		TATGAT TTTAAG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[129]
[2]
  murRp 2545793 murR 184 gcacatttccagcgtcgatacgcggtcaatttcagccgaggcggtgttcgagccttcagtAatcatcttttcaaattgcat
                             -35                  -10       +1                    		GAGCCT ATTTCA [TIM] [129]
  murRp 2545793 murR 184 gcacatttccagcgtcgatacgcggtcaatttcagccgaggcggtgttcgagccttcagtAatcatcttttcaaattgcat
                             -35             -10            +1                    		TGTTCGAGCCT ATTTCA [TIM] [129]
  mutSp 2857019 mutS 74 accagcatcaagaactcgccgttcgcttcttcccctgaaatgattaactccggtatcatgTgcgccttatgtgattacaac
                              -35                -10        +1                    		TCCGGTATCAT TTCCCC [TIM] [130]
  narUp2 1544163 narU 103 tctggctacttaatccccattctgcccccgcggttacgctttcttatctattctttcaatCagcacttcacccaattcatc
                           -35              -10             +1                    		TTATCTATTCT CCCGCG [HIPP] [131]
  nhaAp2 17317 nhaA, nhaR 172 tacttttcctaattaatccctcaggaatcctcaccttaagctatgattatctaggcttagGgtcactcgtgagcgcttaca
                              -35              -10          +1                    		TTATCTAGGCT CTCACC [TIM] [132]
  ompFp 987092 ompF 110 ctttatctttgtagcactttcacggtagcgaaacgttagtttgaatggaaagatgcctgcAgacacataaagacaccaaac
                         -35                     -10        +1                    		AAAGAT GTAGCG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[133]
[2]
  osmBp1 1343476 osmB 148 ctggttgataattaagactatttacctgttattaacactctcaagatataaaattattatCagcgatataacaggaagtca
                                -35               -10       +1                    		AAAATTATTAT TTAACA [TIM] [134]
[135]
  osmBp2 1343369 osmB 41 gcgcgagcagatttcacggaataatttcaccagacttattcttagctattatagttatagAgagcttacttccgtgaatca
                          -35                  -10          +1                    		TATTAT TTCACC [HIPP]
[TIM] 		[134]
[136]
[135]
[137]
  osmBp2 1343369 osmB 41 gcgcgagcagatttcacggaataatttcaccagacttattcttagctattatagttatagAgagcttacttccgtgaatca
                         -35              -10               +1                    		TTAGCTATTAT TTTCAC [HIPP]
[TIM] 		[134]
[136]
[135]
[137]
  osmCp2 1556606 osmC 19 attcggaatatcctgcttatcctcgtgctgtttctcacgtagtctataatttcctttttaAgcccacaggagagcaacaat
                       -35              -10                 +1                    		TAGTCTATAAT TCGTGC [HIPP]
[TIM] 		[138]
[139]
[140]
[141]
  osmEp 1822283 osmE 27 aagcggagccgtttcgttcacgggcttgaaaaagcgcccaatgtattccaggcttatctaAcacgctgataaacaagagga
                                 -35                   -10  +1                    		TATCTA AGCGCC [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[142]
[138]
[143]
[144]
[2]
  osmEp 1822283 osmE 27 aagcggagccgtttcgttcacgggcttgaaaaagcgcccaatgtattccaggcttatctaAcacgctgataaacaagagga
                          -35               -10             +1                    		TATTCCAGGCT TTGAAA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[142]
[138]
[143]
[144]
[2]
  osmFp 2219523 yehW, yehX, yehY, osmF 42 attctgcaactgaatccttccgctcaagctaaccccgccattatcaactatgcttttctcTtaattcgctgaaaacaacag
                         -35                -10             +1                    		TCAACTATGCT CAAGCT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[145]
[2]
  osmYp 4611153 osmY 243 ttgcttatgttttcgctgatatcccgagcggtttcaaaattgtgatctatatttaacaaaGtgatgacatttctgacggcg
                     -35                        -10         +1                    		TATATT ATCCCG [HIPP]
[TIM] 		[138]
[136]
[146]
[147]
[148]
  osmYp 4611153 osmY 243 ttgcttatgttttcgctgatatcccgagcggtttcaaaattgtgatctatatttaacaaaGtgatgacatttctgacggcg
                       -35                 -10              +1                    		TGATCTATATT CCCGAG [HIPP]
[TIM] 		[138]
[136]
[146]
[147]
[148]
  otsAp 1981651 otsA 39 catcatggcgactggcgggtgtgccggatgtctggagctggcttgaaatgataaccaccgCattacaacaaaaaagagaaa
                            -35              -10            +1                    		GAAATGATAAC ATGTCT [HIPP]
[TIM] 		[149]
[150]
  otsBp 1982465 otsA, otsB 78 tttcccaccatagccaaccgccataacggttggctgttcttcgttgcaaatggcgaccccCgtcacactgtctatacttac
                              -35                 -10       +1                    		ATGGCGACCCC TTGGCT [HIPP]
[TIM] 		[149]
[150]
  otsBp2 1982442 otsA, otsB 55 taacggttggctgttcttcgttgcaaatggcgacccccgtcacactgtctatacttacatGtctgtaaagcgcgttctgcg
                           -35               -10            +1                    		CTGTCTATACT ATGGCG [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[151]
[150]
[152]
[2]
  oxyRp 4158457 oxyR 33 tgagcaattatcagtcagaatgcttgatagggataatcgttcattgctattctacctatcGccatgaactatcgtggcgat
                        -35                -10              +1                    		ATTGCTATTCT TTGATA [HIPP]
[TIM] 		[153]
[154]
  oxyRp 4158457 oxyR 33 tgagcaattatcagtcagaatgcttgatagggataatcgttcattgctattctacctatcGccatgaactatcgtggcgat
                        -35                     -10         +1                    		TATTCT TTGATA [HIPP]
[TIM] 		[153]
[154]
  patAp 3219458 patA 36 gtgtttatcccgattttcgcgatcgcagccggagtggcgcaatccctgcaatacttaaatCggtatcatgtgatacgcgag
                                   -35         -10          +1                    		TGCAA TGGCGC [AIPP]
[TIM] 		[155]
  pcnBp3 159171 folK, pcnB 45 cgagtcggcaattgtaaattcaacattctcaaatgcgtcatgctgagctatgattagccgCtatttttttgtcctgaatga
                          -35                    -10        +1                    		TATGAT TTCTCA [HIPP]
[TIM] 		[156]
[157]
[158]
  pcnBp3 159171 folK, pcnB 45 cgagtcggcaattgtaaattcaacattctcaaatgcgtcatgctgagctatgattagccgCtatttttttgtcctgaatga
                           -35              -10             +1                    		TGAGCTATGAT TCTCAA [HIPP]
[TIM] 		[156]
[157]
[158]
  pcnBp4 159391 folK, pcnB 265 aagtgccagattacattcatctgccgctggcgcttaatccacaaggcgctaaactttccaAgcagaatcatgcgcctgcgt
                           -35               -10            +1                    		GGCGCTAAACT CTGGCG [TIM] [158]
  pdeRp 1346843 pdeR 101 tttttaactgactttcgtttgaaaactggcgtttttccaaaactggattacaaataaataTataaaaaaaacaatgcgttt
                          -35               -10             +1                    		TGGATTACAAA CTGGCG [HIPP]
[TIM] 		[159]
  pdhRp 122034 pdhR, aceE, aceF, lpd 58 ttcatgatttcaatcaaaacctgtatggacataaggtgaatactttgttactttagcgtcAcagacatgaaattggtaaga
                          -35                    -10        +1                    		TACTTT TGGACA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[160]
[1]
[161]
[2]
  pdhRp 122034 pdhR, aceE, aceF, lpd 58 ttcatgatttcaatcaaaacctgtatggacataaggtgaatactttgttactttagcgtcAcagacatgaaattggtaaga
                        -35                 -10             +1                    		TTTGTTACTTT TATGGA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[160]
[1]
[161]
[2]
  pfkAp1 4107522 pfkA 30 tactatttgcacattcgttggatcacttcgatgtgcaagaagacttccggcaacagatttCattttgcattccaaagttca
                                        -10                 +1                    		AAGACTTCCGGC   [HTIM] [1]
  pfkAp2 4107474 pfkA 78 accgccatttggcctgacctgaatcaattcagcaggaagtgattgttatactatttgcacAttcgttggatcacttcgatg
                                              -10           +1                    		TTATACTA   [CV(RS-EPT-CBR/TA)]
[HIPP]
[HTIM]
[RS-EPT-CBR] 		[162]
[163]
[53]
[1]
[2]
  pfkBp1 1806351 pfkB 19 ctccaataaatcatattgttaatttcttcactttccgctgattcggtgccagactgaaatCagcctataggaggaaatgat
                           -35               -10            +1                    		GGTGCCAGACT TTCACT [HIPP]
[TIM] 		[164]
[165]
[20]
  pfkBp2 1806323 pfkB 47 atatttatctgcaaaattttaaataaagctccaataaatcatattgttaatttcttcactTtccgctgattcggtgccaga
                              -35                 -10       +1                    		ATTTCTTCACT TCCAAT [TIM] [20]
  pgip 4233722 pgi 36 acattacgctaacggcactaaaaccatcacatttttctgtgactggcgctacaatcttccAaagtcacaattctcaaaatc
                            -35              -10            +1                    		GGCGCTACAAT CACATT [CV(TA/TIM)]
[HIPP]
[HTIM]
[TIM] 		[166]
[1]
  pgip 4233722 pgi 36 acattacgctaacggcactaaaaccatcacatttttctgtgactggcgctacaatcttccAaagtcacaattctcaaaatc
                          -35                     -10       +1                    		TACAAT ATCACA [CV(TA/TIM)]
[HIPP]
[HTIM]
[TIM] 		[166]
[1]
  poxBp 911076 poxB 27 ttagtgcctcctttctctcccatcccttccccctccgtcagatgaactaaacttgttaccGttatcacattcaggagatgg
                           -35                  -10         +1                    		TAAACT TTCCCC [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[167]
[1]
[2]
[147]
  poxBp 911076 poxB 27 ttagtgcctcctttctctcccatcccttccccctccgtcagatgaactaaacttgttaccGttatcacattcaggagatgg
                       -35                 -10              +1                    		TGAACTAAACT TCCCTT [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[167]
[1]
[2]
[147]
  ppkp 2622977 ppk, ppx 67 attcacctgtaaatcgcaagctccagcagtttttttcccccttttctggcatagttggacAtctgccaatattgctcgcca
                                                  -10       +1                    		CATAGT   [HTIM] [15]
  pqiAp1 1011666 pqiA, pqiB, pqiC 335 ccgcggcaaaagcagaaactgtaaaacgcagcagtagcaaactaagctataaattgcagcGcgaactggagcagctaccgc
                   -35                -10                   +1                    		CAAACTAAGCT CTGTAA [HIPP]
[TIM] 		[168]
[169]
  pqiAp1 1011666 pqiA, pqiB, pqiC 335 ccgcggcaaaagcagaaactgtaaaacgcagcagtagcaaactaagctataaattgcagcGcgaactggagcagctaccgc
                     -35                        -10         +1                    		TATAAA GTAAAA [HIPP]
[TIM] 		[168]
[169]
  pqiAp2 1011659 pqiA, pqiB, pqiC 342 gaagccgccgcggcaaaagcagaaactgtaaaacgcagcagtagcaaactaagctataaaTtgcagcgcgaactggagcag
                          -35                -10            +1                    		CAAACTAAGCT CTGTAA [HIPP]
[TIM] 		[169]
  pqiAp2 1011659 pqiA, pqiB, pqiC 342 gaagccgccgcggcaaaagcagaaactgtaaaacgcagcagtagcaaactaagctataaaTtgcagcgcgaactggagcag
                          -35                     -10       +1                    		TAAGCT CTGTAA [HIPP]
[TIM] 		[169]
  proPp2 4330407 proP 95 actggtttgattgtacattccttaaccggagggtgtaagcaaacccgctacgcttgttacAgagattgcatcctgcaattc
                          -35               -10             +1                    		CCCGCTACGCT CCGGAG [HIPP]
[TIM] 		[170]
[171]
[172]
  proVp1 2804563 proV, proW, proX 252 taattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactCtgttgcattattcgcctgaa
                      -35                        -10        +1                    		TACACT TTATCA [TIM] [173]
[174]
  proVp1 2804563 proV, proW, proX 252 taattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactCtgttgcattattcgcctgaa
                          -35               -10             +1                    		TGATCTACACT CACGCA [TIM] [173]
[174]
  pstBp1 3908556 phoU, pstB 190 ttaccctgtgcgtactgctgctgaacattctggcgcgcgttgtttttgcgaagaataaacAcggttgatattgctgacacg
                            -35                    -10      +1                    		AAGAAT TTCTGG [HIPP]
[IMP]
[TIM] 		[175]
  pstBp1 3908556 phoU, pstB 190 ttaccctgtgcgtactgctgctgaacattctggcgcgcgttgtttttgcgaagaataaacAcggttgatattgctgacacg
                              -35             -10           +1                    		TTGCGAAGAAT CTGGCG [HIPP]
[IMP]
[TIM] 		[175]
  pstCp 3910542 phoU, pstB, pstA, pstC 144 cggggctaaacaggcgaacgacctggattacgccagcctgccggatagtgtagttgaacaGgttcgcgctgcgtggaagac
                       -35                    -10           +1                    		TAGTGT CTGGAT [HIPP]
[IMP]
[TIM] 		[175]
  pstCp 3910542 phoU, pstB, pstA, pstC 144 cggggctaaacaggcgaacgacctggattacgccagcctgccggatagtgtagttgaacaGgttcgcgctgcgtggaagac
                       -35             -10                  +1                    		TGCCGGATAGT CTGGAT [HIPP]
[IMP]
[TIM] 		[175]
  pstSp 3911568 phoU, pstB, pstA, pstC, pstS 43 tcataaaactgtcatattccttacatataactgtcacctgtttgtcctattttgcttctcGtagccaacaaacaatgcttt
                     -35                        -10         +1                    		TATTTT TTACAT [HIPP]
[TIM] 		[176]
[177]
[178]
[179]
[180]
  pstSp 3911568 phoU, pstB, pstA, pstC, pstS 43 tcataaaactgtcatattccttacatataactgtcacctgtttgtcctattttgcttctcGtagccaacaaacaatgcttt
                        -35                -10              +1                    		TGTCCTATTTT CATATA [HIPP]
[TIM] 		[176]
[177]
[178]
[179]
[180]
  puuAp 1360968 puuP, ymjE, puuA 60 tcatttttgcaaactcaatttaacatttgacaaacatttagtttgcatacagattcgaatGgtggtcattatattttacgc
                           -35                  -10         +1                    		TACAGA TTGACA [AIPP]
[IMP]
[TIM] 		[57]
[181]
  puuCp 1362728 puuC, puuB, puuE 15 catacggcccggggatctctgcgccctgacgttcacaaactgcatatatctgatagacgtGaaacaggagtcataatgaat
                                                 -10        +1                    		TCTGAT   [HTIM] [15]
  puuDp 1361052 puuD, puuR, puuC, puuB, puuE 68 atgtttgtcaaatgttaaattgagtttgcaaaaatgaaaacccactgctagattgaaaaaAtattgaacataaaggtcatt
                          -35                    -10        +1                    		TAGATT TTGCAA [CV(TA/TIM)]
[HTIM]
[IMP]
[TIM] 		[53]
[181]
  pykAp1 1937544 pykA 105 ttgataagcagttacttaatttaagtgacgatcgctaaaaacgactgtcactgtcctaatCttatacgacatccgaatgag
                                                -10         +1                    		TCACTGTC   [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[53]
[1]
[2]
  pykAp2 1937494 pykA 155 attcagagataacttgaagcgggtcaaagaagcgctgaaggaatcgcgttttgataagcaGttacttaatttaagtgacga
                                                 -10        +1                    		TTTTGATA   [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[53]
[1]
[2]
  pykFp1 1755663 pykF 35 gcaccaccactttcgtaataccggattcgctttccggcagtgcgcccagaaagcaagtttCtcccatccttctcaacttaa
                                              -10           +1                    		CCAGAAAG   [HTIM] [53]
[1]
  pykFp2 1755600 pykF 98 ggctgagacacaagcacacattcctctgcacgctttttcgatgtcacctatccttagagcGaggcaccaccactttcgtaa
                                                -10         +1                    		CTATCCTT   [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[53]
[1]
[2]
  ravAp 3931128 viaA, ravA 35 aaataccccccctttgagactattttagccaccagcaagaaacgtctatactcgcaatttAcgcagaacttttgacgaaag
                                              -10           +1                    		CTATACT   [HTIM] [53]
[182]
  rhaSp 4097711 rhaS, rhaR 25 tacgtggttttccgtcgaaaatttaaggtaagaacctgacctcgtgattactatttcgccGtgttgacgacatcaggaggc
                         -35                -10             +1                    		GTGATTACTAT AAGGTA [TIM] [183]
[184]
[185]
[186]
  rhaSp 4097711 rhaS, rhaR 25 tacgtggttttccgtcgaaaatttaaggtaagaacctgacctcgtgattactatttcgccGtgttgacgacatcaggaggc
                      -35                        -10        +1                    		TACTAT TTTAAG [TIM] [183]
[184]
[185]
[186]
  rpoEp4 2710230 rseC, rseB, rseA, rpoE, rseD 66 ttactggctggtggaggattaggtggtgaaataaaaaggccgttgggttactcttcaggcAgttaaatgggcatttctaca
                          -35                    -10        +1                    		TACTCT GTGAAA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[187]
[2]
  rpoHp1 3601003 rpoH 220 acggtacaacatttacgccactttacgcctgaataataaaagcgtgttatactctttcccTgcaatgggttccgtagcagg
                         -35               -10              +1                    		CGTGTTATACT ACGCCT [HIPP]
[TIM] 		[188]
[189]
[190]
[191]
[192]
  rpoHp1 3601003 rpoH 220 acggtacaacatttacgccactttacgcctgaataataaaagcgtgttatactctttcccTgcaatgggttccgtagcagg
                      -35                       -10         +1                    		TATACT TTTACG [HIPP]
[TIM] 		[188]
[189]
[190]
[191]
[192]
  rraAp 4119358 rraA 28 caaatatcaattaacaattgatgattttgccaacagcccacatagcgcgatatactgaaaAttctcgcagcaactgaatgt
                           -35              -10             +1                    		AGCGCGATATA TTGCCA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[53]
[2]
[193]
  rsdp1 4196954 rsd 146 gatcgaaatttgccgcttcgccatatggcaattctcccttcggcaaccataatttttgttCatggctgacgacccaccagc
                         -35               -10              +1                    		GCAACCATAAT ATGGCA [HIPP]
[TIM] 		[194]
  rssAp 1289106 rssA, rssB 139 atcaggtgcaaccttttcaccagacacataagggtggcaacataggctatactcgacagcActaccacagggacaaagctg
                         -35               -10              +1                    		TAGGCTATACT CACATA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[IMP]
[RS-EPT-CBR]
[TIM] 		[195]
[196]
[2]
  rssBp 1290220 rssB 22 ttatctacacttaagttaattctgacaggcgcaggtggcaatagcatgccactattgagtAaagccagtcaggggagagaa
                          -35                -10            +1                    		CATGCCACTAT CAGGCG [HIPP]
[TIM] 		[196]
  ryjAp 4278066 ryjA 0 tgcggttaaaaagtatacttttacactggcgaagaaacgtcggtgacatacaattaaagcAtcaacaccaaccggaacctc
                          -35                    -10        +1                    		TACAAT CTGGCG [TIM] [197]
  sdsNp2 1996880 sdsN 41 ccttatcctgcatagtaaaccgcaacgcccctgagagtgagtatcatttataatgataatTcaaactatcacataaataag
                          -35                    -10        +1                    		TATAAT CGCCCC [TIM] [198]
  sdsRp 1923207 pphA, sdsR 0 tttttattgaccattttgcacgcaaactggaaaacctggcgtcgtcatctattcttaaagGgcaaggcaactaagcctgca
                           -35                    -10       +1                    		TATTCT CTGGAA [HIPP]
[IMP]
[TIM] 		[199]
[198]
[200]
  sgrSp 77367 sgrS, sgrT, setA 0 gaactcctgtgcaaaagacagcaattttattttccctatattaagtcaataattcctaacGatgaagcaagggggtgcccc
                          -35              -10              +1                    		AAGTCAATAAT TTTATT [AIPP]
[TIM] 		[201]
  sgrSp 77367 sgrS, sgrT, setA 0 gaactcctgtgcaaaagacagcaattttattttccctatattaagtcaataattcctaacGatgaagcaagggggtgcccc
                          -35                   -10         +1                    		AATAAT TTTATT [AIPP]
[TIM] 		[201]
  sodCp 1724679 sodC 24 gtaagcacttttaggaatagccgccgttcaaaaatgtgtcactggtttacacttattcagGaatgcacaatgaacggaggt
                       -35                 -10              +1                    		TGGTTTACACT GCCGTT [CV(TA/TIM)]
[HTIM]
[TIM] 		[202]
[53]
  sohBp1 1329284 sohB 48 aaatggatactttgtcatactttcgctgcaataacatctctgcgagacggcttaacatgcCtgttgtaaactgtgagccaa
                               -35                   -10    +1                    		TAACAT ATAACA [HIPP] [127]
  sohBp1 1329284 sohB 48 aaatggatactttgtcatactttcgctgcaataacatctctgcgagacggcttaacatgcCtgttgtaaactgtgagccaa
                      -35              -10                  +1                    		TCTGCGAGACG TTCGCT [HIPP] [127]
  speBp 3083946 speB 149 gaactgcaacaacagttccttgaagagttcgaggcaggtttgtacggttatacttatcttGaagatgagtaagtcctgtgt
                            -35             -10             +1                    		ACGGTTATACT TTCGAG [HIPP]
[TIM] 		[203]
  speCp 3109175 speC 20 accagtttgacccatatctcatggggcagggttttccaccttgtccggtattcttacttcCccgaaacgggtttgcgctta
                           -35              -10             +1                    		TCCGGTATTCT CAGGGT [AIPP]
[HIPP] 		[204]
[58]
  srap 1556046 sra 83 acgatcaattatgtggtcagtggccagcaccctacgctttaaggtgctatgcttgatcggCaacctaatttaggggtttag
                        -35                -10              +1                    		GGTGCTATGCT CCAGCA [TIM] [205]
[20]
  ssrSp2 3055759 ssrS, fau 224 gcagcggacgatctgaaccaacggttgcaagatctgaaagaacgcactagagtcacaaatActgaacagttggtcttcatt
                         -35               -10              +1                    		CGCACTAGAGT TTGCAA [AIPP]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[206]
[207]
[2]
  ssrSp2 3055759 ssrS, fau 224 gcagcggacgatctgaaccaacggttgcaagatctgaaagaacgcactagagtcacaaatActgaacagttggtcttcatt
                         -35                    -10         +1                    		TAGAGT TTGCAA [AIPP]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[206]
[207]
[2]
  sucAp 758586 sucA, sucB, sucC, sucD 120 cgtaacaaagaaatgcaggaaatctttaaaaactgcccctgacactaagacagtttttaaAggttccttcgcgagccacta
                         -35             -10                +1                    		GACACTAAGAC TTTAAA [TIM] [160]
[3]
  talAp1 2578588 talA, tktB 78 ctataacactgatgttacctgcttaatccagcaataccatgcctgtctgctatgctttttTgatgcgtttagcgaaatttc
                             -35              -10           +1                    		TCTGCTATGCT CAGCAA [TIM] [20]
  talAp2 2578570 talA, tktB 96 aatgttttggtaataatcctataacactgatgttacctgcttaatccagcaataccatgcCtgtctgctatgcttttttga
                              -35             -10           +1                    		CCAGCAATACC ATGTTA [TIM] [20]
  tamp 1607221 tam 125 gcctataaagatgaagacgcagtggcgttccataaaaccacgccccactacaaaacctgtGtcgcgaaactggaatcttta
                                                -10         +1                    		CTACAAA   [HTIM]
[IEP] 		[15]
[65]
  tktBp 2579308 tktB 328 gtggtggaagaagatccgggcgttaaatcggtgcgcaatatctacgactactataagcaaCaccactatgaaaccattgtg
                           -35              -10             +1                    		ACGACTACTAT ATCGGT [HIPP] [208]
  tolCp4 3178074 tolC, ygiB, ygiC 41 ggcacgtaacgccaaccttttgcggtagcggcttctgctagaatccgcaataattttacaGtttgatcgcgctaaatactg
                          -35               -10             +1                    		TCCGCAATAAT TAGCGG [AIPP]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[58]
[2]
[209]
  topAp5 1330789 topA 259 cacgctggtggcaagagcgccttactggcaactttggattttgcatgctaataaagttgcGtatcggattttatcaggtac
                         -35                -10             +1                    		CATGCTAATAA CTGGCA [HIPP]
[TIM] 		[210]
  topAp5 1330789 topA 259 cacgctggtggcaagagcgccttactggcaactttggattttgcatgctaataaagttgcGtatcggattttatcaggtac
                         -35                     -10        +1                    		TAATAA CTGGCA [HIPP]
[TIM] 		[210]
  tpiAp2 4111569 tpiA 62 ggtttgaataaatgacaaaaagcaaagcctttgtgccgatgaatctctatactgtttcacAgacctgctgccctgcggggc
                                               -10          +1                    		CTATACTG   [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[53]
[1]
[2]
  treAp 1247425 treA 49 tgacagttcgcagaatgagatttcgatcatgcagctagtgcgatcctgaactaaggttttCtgatacttgaataccgtttt
                             -35               -10          +1                    		TGAACTAAGGT ATGCAG [HIPP]
[IMP]
[TIM] 		[211]
  treFp 3669551 treF 41 aacgtgatccaccgcacgctttgtcgcccaccaggcggagcgaatgactacccttaaagaAaagccgataattagcgacga
                                             -10            +1                    		TGACTACCCT   [HTIM] [15]
  uspBp 3639848 uspB 128 gaatatattgatagtggttaaccttctggaaaaaaaacaacctgatctcctacactatctAtagagccgctcgtatgttgg
                          -35                 -10           +1                    		TCTCCTACACT CTGGAA [HIPP]
[TIM] 		[212]
[35]
  wrbAp 1067758 yccJ, wrbA 50 ataaatcaaataagtggttgtgaaatttgcactctgaaaaggacgtcttatctttaaataAgtggtagcgaatcgctacgg
                           -35                   -10        +1                    		TATCTTT TTGCAC [CV(RS-EPT-CBR/TA)]
[HTIM]
[RS-EPT-CBR] 		[53]
[2]
  xapAp 2524910 xapB, xapA 32 tattgaatgcgtgagaaaagtgtattggtaagagccgggacaacctcgctataaaaaggcGttagattccaccctacagaa
                         -35                 -10            +1                    		CTCGCTATAAA TTGGTA [HIPP]
[TIM] 		[213]
  xapAp 2524910 xapB, xapA 32 tattgaatgcgtgagaaaagtgtattggtaagagccgggacaacctcgctataaaaaggcGttagattccaccctacagaa
                         -35                      -10       +1                    		TATAAA TTGGTA [HIPP]
[TIM] 		[213]
  xthAp 1832399 xthA 29 atcgatcaaatcacttaacaacaggcggtaagcaacgcgaaattctgctaccatccacgcActctttatctgaataaatgg
                         -35                -10             +1                    		TCTGCTACCAT GCGGTA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM] 		[2]
[214]
  yabIp 71271 yabI 80 gtttcgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtAacgaatcagacaattgacgg
                                                -10         +1                    		TGTCATAAT   [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM] 		[53]
[2]
[215]
  yadVp2 156224 htrE, yadV 23 aattgattgaatgaatatacagggaataataatttctattttatattattccctgttttaAttaactctatcagggatggt
                      -35                 -10               +1                    		TATATTATTCC GGGAAT [HIPP]
[TIM] 		[216]
  ybgAp1 738980 ybgA, phr 21 gtcctgctacaacaggattaacttcacaaatatcatttctcaacgtctacacttactcctGtaaaccgctcaggagcagta
                       -35                 -10              +1                    		ACGTCTACACT TTCACA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[20]
[217]
[2]
  ybgAp2 738920 ybgA, phr 81 cagctatggttagaaactacctgacgtcagtccttgcggggagcaggctttcgtaaatttGtcctgctacaacaggattaa
                                  -35             -10       +1                    		TTCGTAAATTT TTGCGG [TIM] [20]
  ybiIp6 838484 ybiI 28 tggtcggagatctgatgcttgaactgcccgagttcgtccctggattagctacacttaactGtacaagtattgatatgggga
                                                -10         +1                    		GCTACACT   [ICWHO] [58]
[38]
  ybjPp 904523 ybjP 56 ccttgtttgctaagccttcgatctcaaaagcattatcagactgatacgctattattgaaaGgatatcattattatcgtaga
                         -35                 -10            +1                    		TACGCTATTAT CAAAAG [TIM] [20]
  ycgZp 1215752 ycgZ, ymgA, ariR, ymgC 37 gcaaaaaattaatttatcattctgtacacatatttcgtacaagtttgctattgttacttcActtaacattgattaacattt
                         -35                -10             +1                    		TTTGCTATTGT TACACA [HIPP]
[TIM] 		[57]
[218]
  yciGp 1316092 yciE, yciF, yciG 57 ccctctatcttctcgttgcgcttaatttgactaattctcattagcgactaattttaatgaGtgtcgacacacaacactcat
                           -35              -10             +1                    		GCGACTAATTT TTGACT [AIPP]
[HIPP] 		[58]
[219]
  yciTp 1344510 yciT 164 gatattgtgttagatatccttgtggcaggcgattaccactctgcgatccataatctcgagAtacttaaagcagaactcttg
                                                -10         +1                    		CCATAAT   [HTIM] [15]
  yciZp 1344638 yciT, yciZ 29 gataattagccgttgctgttaaacacttctcttttagcggcaatttttgcattattcattTtcccccttttgctataagga
                               -35              -10         +1                    		TGCATTATTCA CTTTTA [TIM] [220]
  ydbDp 1475066 ydbD 78 ggagaatatggctgctgaaaaattgcatctttctgaggaagtgttgtctacgttggatggTatttcgcgagaataacgaat
                          -35               -10             +1                    		TTGTCTACGTT CATCTT [AIPP]
[IEP] 		[57]
[65]
  ydbKp4 1440846 ompN, ydbK 62 cgctgatgtgggggacacaaaagcgaaaatgcagaagaaagccatttgctaaaattgaaaGattactactgggcgcgcagc
                                                  -10       +1                    		TAAAAT   [ICWHO] [58]
[38]
  ydcSp1 1511599 ydcS, ydcT, ydcU, ydcV, patD 55 gaataaattttctcaggggcgaaggtgtgcctgcaagccgccgtctatggttaaacaaggAgatatttttacggcacggcg
                                            -10             +1                    		TCTATGGTTAA   [HIPP] [221]
  yddGp 1547205 yddG 36 gcggtagaaaaacgcaccactgcctgacaggccagttaaaaaaatgctataaaattcagcTtaatttttaacggcaagaga
                        -35                -10              +1                    		AATGCTATAAA CTGACA [TIM] [222]
  ydhYp 1754642 ydhT, ydhU, ydhX, ydhW, ydhV, ydhY 165 tgtaattttaattgataacgatcaatgttaagggctcagaataatcacattattttttctCctaaccataaaggattagtt
                            -35               -10           +1                    		CACATTATTTT TTAAGG [TIM] [223]
  yeiLp 2255290 yeiL 65 aaagaaaattcgaccgggccgatgattgaatcttaacaacagcgtacgtatgctaaatatGagaaatctcatagcggataa
                                 -35             -10        +1                    		TATGCTAAATA TTAACA [HIPP]
[TIM] 		[224]
  yffOp 2562053 yffO, yffP 58 acgccaaaattagcgctgaattaatgggtaattattgcggtttttgtcaattttcaacctCaattcttgcgaaaaatggca
                                             -10            +1                    		TGTCAATTT   [HTIM] [15]
  yggEp1 3068126 yggE 46 ccttgttcagttaggcgctatctgatggaaaaataaaacagaggcgctaagcttgcctccAgaggtcctgaattttgggca
                         -35               -10              +1                    		GGCGCTAAGCT ATGGAA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[20]
[2]
  yggEp2 3068185 yggE 105 atgtgttatgtggtttattgccttgcagctggcgagagacggtattgctcatgcacaagcCttgttcagttaggcgctatc
                          -35                -10            +1                    		TTGCTCATGCA CAGCTG [TIM] [20]
  yhfGp 3491648 pabA, fic, yhfG 28 caatcttgcccgcgcttctgctctcccggcgtaacccggatttgccgcttatacttgtggCaaatggacacgttcagggag
                                                  -10       +1                    		TATACT   [CV(RPF/RS-EPT-CBR)]
[CV(RPF/TA)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[HIPP]
[IEP]
[IMP]
[RPF]
[RS-EPT-CBR]
[TIM] 		[138]
[225]
[2]
[226]
[227]
  yhiMp 3634743 yhiM 98 tggccttttgaacgctgaaaagtagcgctctgcaaagtaaaccccgctatagttatgctaTgcatttgtctttaatgatat
                       -35                 -10              +1                    		CCCGCTATAGT TAGCGC [AIPP] [57]
[31]
  yhjGp 3678412 yhjG 62 tttcacgcccggcaccgatagaaacgctgaatacggcggttctggcgctataagctgcctCattttccgcctggctggact
                                                -10         +1                    		CTATAAG   [HTIM]
[IEP] 		[15]
[65]
  yiaGp 3719431 yiaG 47 agccagagcatgccctgacttcaccccgctgtgtctgcttttcccgactattcttaatgaGcttcgatgcaattcacgatc
                          -35               -10             +1                    		CCGACTATTCT CCGCTG [TIM] [20]
  yihGp 4046652 yihG 50 attttttctaatgtggatagatatgaattatttttctccttaaggatcatccgttatttgGgtcgttttctgctaaaatct
                       -35                 -10              +1                    		AGGATCATCCG ATGAAT [HIPP]
[TIM] 		[228]
  yjcCp 4275418 pdeC 53 atttcaaatcaggcaaaagtgctatttataccgtaagatttatctaaagacgtcggtaccCagggttttcaccttgcaatg
 		    [HTIM] [229]
  yjiYp 4591367 btsT 88 aaataaccactcagttatttaccttactttacgcgcgcgtaactctggcaacatcactacAggatagcggtcaatttacct
                           -35                -10           +1                    		TGGCAACAT CTTTACG [TIM] [230]
  ynfBp 1655709 ynfB, speG 99 aaaatagtaacgttgttttaatcatctttgtctcttattgacatcatgtatagttataggGcgacataatatcatcaatat
 		    [HTIM] [53]
[31]
  ynfEp 1658003 ynfE, ynfF, ynfG, ynfH, dmsD 66 tcatacccttctattgatatggattaataattcttaacccaaaatgggtagactccctctAttgttagcgcgctaaatatt
                        -35                 -10             +1                    		ATGGGTAGACT TTAATA [AIPP]
[RPF] 		[231]
[232]
  ynfEp 1658003 ynfE, ynfF, ynfG, ynfH, dmsD 66 tcatacccttctattgatatggattaataattcttaacccaaaatgggtagactccctctAttgttagcgcgctaaatatt
                        -35                      -10        +1                    		TAGACT TTAATA [AIPP]
[RPF] 		[231]
[232]
  ytfKp 4439511 ytfK 76 ctttaggtaaaaaaagttatacgcggtggaaacattgcccggatagtctatagtcactaaGcattaaaatttgcgcctcat
                          -35               -10             +1                    		TAGTCTATAGT GTGGAA [CV(RS-EPT-CBR/TA)]
[CV(TA/TIM)]
[RS-EPT-CBR]
[TIM] 		[20]
[2]
  znuAp 1942661 znuA 78 gaggacgcggcgttggccaaaagaaaccgagacattttccagggaaaccagacttgtcatGttaattttagtcttgcagta
                           -35              -10             +1                    		GAAACCAGACT CCGAGA [AIPP] [58]
Evidence: [CV(RS-EPT-CBR/TA)] cross validation(RS-EPT-CBR/TA)
[CV(TA/TIM)] cross validation(TA/TIM)
[HTIM] High-throughput transcription initiation mapping
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates
[TIM] Transcription initiation mapping
[HIPP] Human inference of promoter position
[AIPP] Automated inference of promoter position
[IMP] Inferred from mutant phenotype
[CV(RPF/RS-EPT-CBR)] cross validation(RPF/RS-EPT-CBR)
[CV(RPF/TA)] cross validation(RPF/TA)
[RPF] RNA polymerase footprinting
[CV(RPF/TIM)] cross validation(RPF/TIM)
[NAS] Non-traceable author statement
[ICA] Inferred by computational analysis
[IEP] Inferred from expression pattern
[IHBCE] Inferred by a human based on computational evidence
[ICWHO] Inferred computationally without human oversight
[TAS] Traceable author statement


Reference(s)    

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