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Transcribed promoters | ![]() |
---|
Promoter Name | TSS Position | Transcribed Gene(s) | Distance from TSS to gene |
Promoter Sequence |
Box (-10) |
Box (-35) |
Evidence Code(s) | Reference(s) | |
---|---|---|---|---|---|---|---|---|---|
aceEp2 | 122969 | aceE, aceF | 48 | aaagcgcggcaactaaacgtagaacctgtcttattgagctttccggcgagagttcaatggGacaggttccagaaaactcaa -35 -10 +1 |
CCGGCGAGAGT | CTGTCT | [HTTIM] [ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
[1] [2] [3] [4] |
|
acsp | 4287391 | actP, yjcH, acs | 20 | atactaaacaaaactgccaatacccctacatttaacgcttatgccacatattattaacatCctacaaggagaacaaaagca -35 -10 +1 |
ATATTATT | TTTAACGCT | [AIPP] [HTTIM] [IHBCE] |
[5] [6] [2] |
|
adap2 | 2310427 | alkB, ada | 22 | aaaaattaaagcgcaagattgttggtttttgcgtgatggtgaccgggcagcctaaaggctAtccttaaccagggagctgat -35 -10 +1 |
CAGCCTAAAGG | TTGCGT | [ICWHO] [IDA] [IEP] [TIM] |
[1] [7] [8] [9] |
|
adhEp | 1298413 | adhE | 292 | ttgttatctagttgtgcaaaacatgctaatgtagccaccaaatcatactacaatttattaActgttagctataatggcgaa -35 -10 +1 |
CATACTACAAT | GCTAAT | [ICWHO] [IMP] [TIM] |
[10] [1] [11] |
|
adhEp2 | 1298309 | adhE | 188 | tttgcaaaaatttgatttggatcacgtaatcagtacccagaagtgagtaatcttgcttacGccacctggaagtgacgcatt -35 -10 +1 |
GTGAGTAATCT | CACGTA | [APIORCISFBSCS] [HIPP] [ICWHO] [IMP] [TIM] |
[10] [1] [11] |
|
adrAp | 403687 | dgcC | 16 | tacgaaaatggctcacccgaaatatcatacttctgcctttagctccgtctctataatttgGgaaaattgtttctgaatgtt -35 -10 +1 |
GTCTCTATAAT | TTCTGC | [HIPP] [ICWHO] [IEP] [TIM] |
[12] [1] [13] [14] |
|
aidBp2 | 4414247 | aidB | 28 | gataagaatgttttagcaatctctttctgtcatgaatccatggcagtgaccatactaatgGtgactgccattgatggaggg -35 -10 +1 |
GTGACCATACT | GTCATG | [ICWHO] [IDA] [IEP] [IMP] [TIM] |
[1] [7] [15] [16] [17] [18] |
|
aldBp | 3756535 | aldB | 24 | gctgtcgtaaagctgttaccgactggcgaagatttcgccagtcacgtctacccttgttatAcctcacaccgcaaggagacg -35 -10 +1 |
ACGTCTACCCT | GCGAAG | [ICWHO] [IEP] [TIM] |
[1] [19] |
|
alkAp2 | 2147559 | alkA | 19 | tcgcgacaaccggaatatgaaagcaaagcgcagcgtctgaataacgtttatgctgaaagcGgatgaataaggagatgcgat -35 -10 +1 |
ACGTTTATGCT | AGCGCA | [CV(RPF/RS-EPT-CBR)] [ICWHO] [IDA] [IEP] [RPF] [RS-EPT-CBR] |
[1] [20] [21] [22] [3] |
|
ansPp1 | 1526011 | ansP | 31 | gaataatggtgataactatcatcgccaggatgaataaacattgttcatggcaacttatatGactttttcattaaagcaatc -35 -10 +1 |
ATGGCAACTTA | ATGAAT | [ICWHO] [TIM] |
[1] [23] |
|
ansPp2 | 1526020 | ansP | 40 | acccataaagaataatggtgataactatcatcgccaggatgaataaacattgttcatggcAacttatatgactttttcatt -35 -10 +1 |
TTGTTCATGGC | TCGCCA | [ICWHO] [TIM] |
[1] [23] |
|
appCp2 | 1037710 | appC, appB, appX, appA | 30 | ggcgaatacctctggtcgtagagtttcaggataaagagggagatctaccattatcgggttAtttttctctcttcgcctaca -35 -10 +1 |
AGATCTACCAT | TTTCAG | [HIPP] [ICWHO] |
[24] [25] [26] [1] |
|
appYp2 | 583656 | appY | 25 | gcacatcatcctgattatgattgtgtatttaattggttgttatttgactactatcaacttGttttaattttatgataggtg -10 +1 |
TGACTACTATC | [HTTIM] [IEP] [IHBCE] |
[17] | ||
araFp2 | 1986148 | araH, araG, araF | 20 | aatgctttgttttccgattaatttaacgaatgtcattcgtttttgccctacacaaaacgaCactaaagctggagagaacca -10 +1 |
TTTGCCC | [HTTIM] [IEP] [IHBCE] |
[17] | ||
araFp3 | 1986238 | araH, araG, araF | 110 | aattctgcgatgtgatattgctctcctatggagaattaatttctcgctaaaactatgtcaAcacagtcacttatcttttag -35 -10 +1 |
CTCGCTAAAAC | CTCCTA | [ICWHO] [IEP] [IHBCE] [TIM] |
[27] [1] [17] |
|
arrSp2 | 3658054 | arrS | 0 | caagaataagttatcaataaccagtttgtgatctctgaagaatattactaaagttaaaatGtaatccgatttaaatatcga -35 -10 +1 |
ATTACTAAAGT | TTGTGA | [HIPP] [ICWHO] [IEP] [IHBCE] |
[28] [1] |
|
artPp1 | 903815 | artM, artQ, artI, artP | 81 | ccgcccccgttattttgtgctatgtttattgaataatgcgctttgcttttaacttttaaaGcagaaatattgcataattat -35 -10 +1 |
CTTTTAACTTT | TTGAAT | [ICWHO] [IEP] [TIM] |
[1] [23] |
|
artPp2 | 903836 | artM, artQ, artI, artP | 102 | gacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaataatgcGctttgcttttaacttttaaa -35 -10 +1 |
ATGTTTATTGA | CCCGTT | [ICWHO] [IEP] [TIM] |
[1] [23] |
|
artPp3 | 903843 | artM, artQ, artI, artP | 109 | gaatgccgacatttatgctcgccgaccaccgcccccgttattttgtgctatgtttattgaAtaatgcgctttgcttttaac -35 -10 +1 |
TGTGCTATGTT | CCACCG | [ICWHO] [IEP] [TIM] |
[1] [23] |
|
asrp2 | 1671327 | asr | 49 | gttacacgctgaaaccaaccactcacggaagtctgccattcccagggatatagttatttcAacggccccgcagtggggtta -35 -10 +1 |
ATAGTTATTTC | CTGCCA | [ICWHO] [IHBCE] [IMP] [IPI] [TIM] |
[1] [29] [30] [31] |
|
astCp3 | 1832039 | astE, astB, astD, astA, astC | 57 | tccgccgtttatgcacttttatcactggctggcacgaaccctgcaatctacatttacagcGcaaacattacttattattaa -35 -10 +1 |
CAATCTACATT | CTGGCT | [APIORCISFBSCS] [CV(RPF/TIM)] [HIPP] [ICWHO] [RPF] [TIM] |
[32] [1] [33] |
|
blcp | 4377745 | blc | 23 | catcgggtccgaattttcggaccttttctccgcttttccttgctgtcatctacacttagaAaaaaaccagtaaggaaacat -35 -10 +1 |
TCATCTACACT | TCCGCT | [ICWHO] [IMP] [TIM] |
[34] [1] |
|
blrp | 1704512 | blr | 39 | atcgcaaaaacctcagtaaaaatcttgctggagctattattgctaagtaacatttaccccCtgaagttaatggatcaatca |
[IEP] [IPI] [RS-EPT-CBR] [TIM] |
[3] [35] [36] |
|||
bolAp | 454434 | bolA | 38 | aacctaaatatttgttgttaagctgcaatggaaacggtaaaagcggctagtatttaaaggGatggatgacatctcagcgtt -35 -10 +1 |
GCGGCTAGTAT | CTGCAA | [AIPP] [CV(RPF/RS-EPT-CBR)] [CV(RPF/TIM)] [ICWHO] [IEP] [RPF] [RS-EPT-CBR] [TIM] |
[37] [38] [1] [39] [40] [17] [41] [3] [42] |
|
bsmAp | 4416869 | bsmA | 99 | atgacatgaagaaatccttagcacaagtttctgctggcggtattagttcataatgttgagAtgtgggttacgctttcgtca -10 +1 |
CATAAT | [IDA] [IHBCE] [NTAS] |
[43] | ||
cbpAp | 1064037 | cbpM, cbpA | 262 | ttccaggcctgtttcaaataattatttgcagtgcaactaattccatgtatattactacccAtatatagcgtctataaaatt -35 -10 +1 |
TATATT | TTTGCA | [IDA] [IHBCE] [TIM] |
[44] | |
cbpAp2 | 1063828 | cbpM, cbpA | 53 | tttcaataacatattctgtgttggcatatgaaattttgaggattaccctacacttataggAgttaccttacaggggttcct -35 -10 +1 |
TACCCTACACT | ATGAAA | [CV(RPF/RS-EPT-CBR)] [CV(RPF/TIM)] [HIPP] [ICWHO] [IDA] [RPF] [RS-EPT-CBR] [TIM] |
[1] [3] [45] [46] |
|
cfap | 1741201 | cfa | 212 | tacttaggctgctaacaaaattttgttgtatgattgaaattagcggcctatactaatttcGagttgttaaagctacgataa -35 -10 +1 |
CGGCCTATACT | GTTGTA | [HIPP] [ICWHO] [IEP] [IHBCE] [RS-EPT-CBR] [TIM] |
[1] [40] [47] [3] [48] |
|
cfap2 | 1741379 | cfa | 34 | agactcgcggttttttctgcgagatttctcacaaagcccaaaaagcgtctacgctgttttAaggttctgatcaccgaccag -35 -10 +1 |
GCGTCTACGCT | CTCACA | [HIPP] [ICWHO] [IDA] [IHBCE] [TIM] |
[1] [47] [48] |
|
cpxRp2 | 4105686 | cpxA, cpxR | 16 | gggggtgtaaaacaacgtaaagtcatggattagcgacgtctgatgacgtaatttctgcctCggaggtatttaaacaatgaa |
[HIPP] [IEP] |
[49] [50] |
|||
crrpI | 2535610 | crr | 224 | aggcaaatggactggcatgtgtggtgagcttgctggcgatgaacgtgctacacttctgttGctggggatgggtctggacga |
[IEP] [TIM] |
[51] [52] |
|||
csgBp2 | 1103859 | csgB, csgA, csgC | 92 | aagaaaaatacaacgcgcgggtgagttattaaaaatatttccgcagacatactttccatcGtaacgcagcgttaacaaaat -35 -10 +1 |
CATACTT | TTATTA | [CV(RPF/TIM)] [IHBCE] [RPF] [TIM] |
[53] [54] [55] |
|
csgDp | 1103335 | csgG, csgF, csgE, csgD | 139 | tagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatcagatgtaaTccattagttttatattttac -35 -10 +1 |
TAGATTGAAATC | TTGATT | [IHBCE] [TIM] |
[55] [29] |
|
csgDp3 | 1103344 | csgG, csgF, csgE, csgD | 148 | agttacatttagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatCagatgtaatccattagtttt -35 -10 +1 |
ATGGCTAGATT | TTGATT | [ICWHO] [IEP] [TIM] |
[50] [56] [1] [29] |
|
csiDp | 2788927 | glaH, lhgD, gabD, gabT, gabP | 58 | ataagaaaacaatatgtcgcttttgtgcgcatttttcagaaatgtagatatttttagattAtggctacgaaatgagcatcg -35 -10 +1 |
ATTTTTAGATT | TTTTCA | [ICWHO] [TIM] |
[1] [57] [58] |
|
csiEp2 | 2665401 | csiE | 34 | cttgccaacatttctgatgattagcattcccttcgccatttccttgagcaaactttagctAttcttatcaattatgcttat -35 -10 +1 |
TGAGCAAACTT | TTCCCT | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[1] [59] |
|
csrAp | 2819373 | csrA | 227 | tacctgcagcgttagccagtgtgaaaggctgggtcagcgcgaaattgcaataatataagcGtcaggcaatgccgtggactc -35 -10 +1 |
ATTGCAATAAT | AAGGCT | [HIPP] [ICWHO] [IHBCE] [IMP] [IPI] [TIM] |
[1] [60] |
|
csrAp3 | 2819273 | csrA | 127 | aacgctatcgacaacgataaagtcaggttgaagttgtgtatatcggctaaacttaggtttAacagaatgtaatgccatgac -35 -10 +1 |
TCGGCTAAACT | CAGGTT | [HIPP] [HTTIM] [ICWHO] [IEP] [IHBCE] [IMP] [IPI] [RS-EPT-CBR] [TIM] |
[61] [1] [62] [3] [60] |
|
cyaRp3 | 2167114 | cyaR | 0 | tggaaaattcttagaaaccgatcacatacagctgcatttattaaggttatcatccgtttcGctgaaaaacataacccataa -35 -10 +1 |
AAGGTTATCAT | CATACA | [AIPP] [HTTIM] [ICWHO] [IDA] [IEP] [IHBCE] [RS-EPT-CBR] [TIM] |
[63] [1] [64] [17] [3] |
|
ddpXp2 | 1563201 | ddpF, ddpD, ddpC, ddpB, ddpA, ddpX | 125 | tacgattccgggagattccttccttaacttcccctcttgcaccaaaactgcactacgctgCacaaatgttgatcaaaagtt -10 +1 |
CTGCACT | [HIPP] [IEP] [IHBCE] |
[65] | ||
ddpXp3 | 1563249 | ddpF, ddpD, ddpC, ddpB, ddpA, ddpX | 173 | gggttttcatttaacgtgacactgtcacttaaatactgtgatttcagctacgattccgggAgattccttccttaacttccc -10 +1 |
CTACGAT | [HIPP] [IEP] [IHBCE] |
[65] | ||
dhaKp | 1250944 | dhaM, dhaL, dhaK | 106 | aaagtttcaatatggaacattcattaaagcatatgtttcactatgaaacataatttgggcTaattttcttttcccttgcct -35 -10 +1 |
TTCACTATGAA | TTCATT | [AIPP] [ICWHO] |
[1] [62] |
|
dhaRp | 1251003 | dhaR | 63 | tagcccaaattatgtttcatagtgaaacatatgctttaatgaatgttccatattgaaactTttacgtgtattaatacttaa -35 -10 +1 |
TGTTCCATATT | GAAACA | [AIPP] [ICWHO] |
[66] [1] |
|
dinBp2 | 250880 | dinB, yafN, yafO, yafP | 18 | cgcgttaaatgctgaatctttacgcatttctcaaaccctgaaatcactgtatactttaccAgtgttgagaggtgagcaatg -35 -10 +1 |
CACTGTATACT | TTCTCA | [AIPP] [ICWHO] [IEP] |
[1] [67] |
|
dkgAp | 3156571 | dkgA | 52 | cccgctaagctttttacgcctcaaactttcgttttcgggcatttcgtccagacttaagttCacaacacctcaccggagcct |
[HTTIM] [IEP] |
[52] [62] |
|||
dkgBp | 229098 | dkgB | 69 | tttttttcgtctgtatatctattattgccagaatcgcaaaaatcctctgcattttacgctCtttttcctcaacagtctgaa -35 -10 +1 |
CATTTTACGCT | ATCGCA | [AIPP] [ICWHO] |
[66] [1] |
|
dnaNp | 3882733 | recF, dnaN | 412 | aacgacattcgtttgccgggcgaagtggcgttctttatcgccaagcgtctacgatctaacGtacgtgagctggaaggggcg -35 -10 +1 |
GCGTCTACGAT | GTGGCG | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[68] [1] [69] |
|
dnaNp5 | 3882348 | recF, dnaN | 27 | gccgtaagatcgagcagttgcgtgaagagagccacgatatcaaagaagatttttcaaattTaatcagaacattgtcatcgt -35 -10 +1 |
TTTTTCAAATT | GCCACG | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[68] [1] [69] |
|
dnaNp6 | 3882590 | recF, dnaN | 269 | tgaggcgctgcgcgacttgctggcattgcaggaaaaactggtcaccatcgacaatattcaGaagacggtggcggagtacta -35 -10 +1 |
CCATCGACAAT | TTGCAG | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[68] [1] [69] |
|
dpsp2 | 848950 | dps | 39 | attagtgtgataggaacagccagaatagcggaacacatagccggtgctatacttaatctcGttaattactgggacataaca -35 -10 +1 |
GGTGCTATACT | TAGCGG | [ICWHO] [IEP] [IPI] [RS-EPT-CBR] [TIM] |
[70] [1] [23] [17] [43] [3] |
|
ecnBp | 4376509 | ecnB | 44 | ttctcttccgaaaaatcatcagattcccatcatttttggcgatgttgtctattattaattTgctataggcaaacataaata -35 -10 +1 |
TTGTCTATTAT | TCCCAT | [ICWHO] [IEP] [IHBCE] [TIM] |
[71] [1] |
|
elaBp | 2381053 | elaB | 26 | ttgggatggcacgcgaggtaattcaggcgtaatcaacaacccttgtctatagttagtgacAggttttacgcaaatggagaa -35 -10 +1 |
TCTATAGTTA | TTCAGG | [ICA] [ICWHO] [IDA] [IEP] [RS-EPT-CBR] [TIM] |
[72] [73] [3] [74] |
|
enop5 | 2908152 | eno | 211 | tctgcgcgttgcgggccgttccggggatgatcagttggtcgagatcatcgaagttccgaaTcacccgtggttcgtggcttg -10 +1 |
ATCGAAGT | [HTTIM] [IHBCE] |
[2] | ||
enop8 | 2907968 | eno | 27 | gtaaaaaagttagagcggcaacgcgtaccctgggtacgcgttgtttgtctggagtttcagTttaactagtgacttgaggaa -10 +1 |
CTGGAGTT | [HTTIM] [IHBCE] [RS-EPT-CBR] |
[2] [3] |
||
epdp2 | 3073823 | fbaA, pgk, epd | 132 | aatgtcttcttcggctggacaaacattccttttattccacgtttcgcttatcctagctgaAgcgtttcagtcgattaaatg -35 -10 +1 |
TCGCTTATCCT | TTCCTT | [HIPP] [HTTIM] [ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
[75] [76] [1] [2] [3] |
|
evgAp1 | 2483641 | evgA, evgS | 114 | tccctgattttattgttgacatttcatttatgccgactatttatatggtatacttgtcgaAttatcttaaaggaagctcag -35 -10 +1 |
TATGGTATACT | TTTATG | [ICWHO] [IEP] [RS-EPT-CBR] [TIM] |
[1] [77] [3] [78] |
|
fadLp | 2461205 | fadL | 101 | tttgaaaaaagatagaaacatacttgcaacattccagctggtccgacctatactctcgccActggtctgatttctaagatg -35 -10 +1 |
CGACCTATACT | TTGCAA | [HIPP] [ICWHO] [IEP] [TIM] |
[79] [80] [81] [1] [40] [52] |
|
fbaBp | 2178667 | fbaB | 103 | gcgctaacattttttctgatgaatcgagccaacagaaaacgctgaaaaaacatccaaaagAtggaaaaactcgcccgtaac -35 -10 +1 |
ACATCCAAAAG | CAGAAA | [AIBSCS] [AIPP] [ICWHO] [TIM] |
[1] [23] |
|
frdAp2 | 4382412 | frdD, frdC, frdB, frdA | 94 | taaaaaaatcgatctcgtcaaatttcagacttatccatcagactatactgttgtacctatAaaggagcagtggaatagcgt -35 -10 +1 |
TATACT | TTTCAG | [IHBCE] [TIM] |
[82] [83] |
|
ftsQp | 102867 | ftsQ, ftsA, ftsZ | 288 | tactcggtgaagaaattttaccgtcaatacgtattcaaccgtccggaaccttctatgattAtgaggcgaagtatctctctg -35 -10 +1 |
CCTTCTATGAT | TATTCA | [HIPP] [ICWHO] [IDA] [IHBCE] [TIM] |
[84] [85] [1] [86] [87] |
|
ftsQp2 | 102742 | ftsQ | 413 | cagtgtgggaatgtcaaaagtagtagcagaaaatgctctacaagatgcattaagattggcAtttcagcacgatgaagaagt -35 -10 +1 |
TGCATTAAGAT | CAGAAA | [APIORCISFBSCS] [HIPP] [ICWHO] [IDA] [TIM] |
[84] [85] [1] [87] |
|
fumCp2 | 1686709 | fumC | 121 | cagatacaactcacacaatgcacccgctgtgtgaaataaacagagccgcccttcggggcgGtttttttacatggcacgaaa -35 -10 +1 |
CGCCCTTCGGG | GTGAAA | [ICWHO] [IEP] [TIM] |
[88] [1] [89] |
|
gabDp | 2791172 | gabD, gabT, gabP | 101 | ggcagcgacatcagcaattcctattggtgcgcatattgtcagcaaggtacaaacgctgttGgcaagccagagtaaccccgg -35 -10 +1 |
CAAGGTACAAA | TTGGTG | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[1] [17] [90] |
|
gabDp2 | 2790912 | gabD, gabT, gabP | 361 | gagattttgggctcgtcggggattcgccgggtgctgcaaaaccatctacgctcaggactgGgcgagatgaaaaactcgctg -35 -10 +1 |
CCATCTACGCT | TCGCCG | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[1] [17] [58] |
|
gadAp2 | 3667607 | gadX, gadA | 27 | tatttaaattaagcctgtaatgccttgcttccattgcggataaatcctacttttttattgCcttcaaataaatttaaggag -35 -10 +1 |
TACTTTTTT | TTGCTT | [HIPP] [IEP] [IHBCE] [TIM] |
[91] [55] [92] [93] |
|
gadBp2 | 1572072 | gadC, gadB | 27 | tatttaaacacgagtcctttgcacttgcttactttatcgataaatcctacttttttaatgCgatccaatcattttaaggag -35 -10 +1 |
AATCCTACTTT | CTTGCT | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[91] [55] [1] [92] [93] |
|
gadEp1 | 3658242 | gadE, gadF | 124 | ttaggatcaatatatggagtgcgtgatggataaatctgaagtattgattagtgttaatagAcgtattagttcacgaagggt -35 -10 +1 |
TTGATTAGTGT | TGGATA | [ICWHO] [IEP] [TIM] |
[94] [1] [95] |
|
gadEp2 | 3658345 | gadE, gadF, mdtE, mdtF | 21 | atattgaacaacgattcggacaaggatgtaaataatgaaaaggatgacatattcgaaacgAtaacggctaaggagcaagtt -35 -10 +1 |
TATTCGAAACG | AATGAA | [ICWHO] [TIM] |
[1] [96] |
|
gadXp | 3665839 | gadW, gadX | 29 | tttaaatttatttatcaatcaatttgacttaagagggcggcgtgctacattaataaacagTaatatgtttatgtaatatta -35 -10 +1 |
CGTGCTACATT | TTGACT | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[1] [97] |
|
gadYp | 3664864 | gadY | 0 | atagcttatgtttataaaaaaatggctgatcttatttccagtaaaagttatatttaacttActgagagcacaaagtttccc -35 -10 +1 |
AAAGTTATATT | CTGATC | [AIBSCS] [AIPP] [ICWHO] [IMP] [TIM] |
[1] [98] |
|
galEp | 792081 | galM, galK, galT, galE | 26 | gattccactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcAtaccataagcctaatggagc -35 -10 +1 |
TATGCTATGGT | CTTTTC | [APIORCISFBSCS] [CV(RPF/TIM)] [ICWHO] [IDA] [RPF] [TIM] |
[99] [100] [1] [101] [102] [103] |
|
gapAp | 1862735 | gapA | 36 | gtcgcaatgattgacacgattccgcttgacgctgcgtaaggtttttgtaattttacaggcAaccttttattcactaacaaa -35 -10 +1 |
TTTGTAATTTT | TTGACG | [HIPP] [HTTIM] [ICWHO] [IHBCE] [IMP] [RS-EPT-CBR] [TIM] |
[76] [104] [1] [2] [3] [105] |
|
glgCp3 | 3569571 | glgP, glgA, glgC | 243 | tttggtggagaatcgctggtgggaagaaggcgacggcaatgtccgttggctaaatcgataTgctcaacctttaagcacgga -35 -10 +1 |
TTGGCTAAATC | AAGGCG | [ICWHO] [IHBCE] [TIM] |
[1] [17] [106] |
|
glgSp1 | 3192012 | glgS | 73 | ttcactaaaaagtgtgatcggggacaatatatttacgcacgttatgtttaaaggcactacActgattggggaatactgaaa -35 -10 +1 |
CACGTTATGTT | TCGGGG | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[107] [1] |
|
glgSp2 | 3192002 | glgS | 63 | agtgtgatcggggacaatatatttacgcacgttatgtttaaaggcactacactgattgggGaatactgaaatcagaaaaag -35 -10 +1 |
GGCACTACACT | TACGCA | [ICWHO] [TIM] |
[107] [1] |
|
glkp2 | 2509461 | glk | 35 | ttacagggagcctgcctttccggcgttgttgttatgcccccaggtatttacagtgtgagaAagaattattttgactttagc -10 +1 |
TTACAGTG | [HIPP] [HTTIM] [IHBCE] |
[108] [2] |
||
glkp3 | 2509447 | glk | 21 | cctttccggcgttgttgttatgcccccaggtatttacagtgtgagaaagaattattttgaCtttagcggagcagttgaaga -10 +1 |
AAAGAATT | [HTTIM] [IHBCE] [RS-EPT-CBR] |
[62] [2] [3] |
||
glsAp | 511573 | glsA, ybaT | 68 | ggattagacatttatctctttgttttcctgtagttaagttgcgggtgctaagttaaatcaGgatgcctgaaaatcggcacc |
[IEP] [IPI] [TIM] |
[109] [35] |
|||
gltBp2 | 3354509 | gltB, gltD, gltF | 216 | acatttctgtaccaataagcttgccatttgacctgtatcagctttcccgataagttggaaAtccgctggaagctttctgga |
[HIPP] [IPI] [TIM] |
[110] [35] [111] |
|||
gorp2 | 3646112 | gor | 187 | aactggcggtactgccagacagcgatcgccgtggcatgaccgcttccggcatgattgtgaTtaacccgccgtggaaactgg -35 -10 +1 |
CATGAT | ATCGCC | [AIPP] [ICWHO] [IEP] |
[112] [1] |
|
gpmAp3 | 787670 | gpmA | 75 | tgcaactcaatattcacaacaaccttacactgcgccactattttcgctatggttatgcgtAagcattgctgttgcttcgtc -10 +1 |
CTATGGTT | [HTTIM] [IHBCE] [RS-EPT-CBR] |
[2] [3] |
||
gpmAp4 | 787632 | gpmA | 37 | tattttcgctatggttatgcgtaagcattgctgttgcttcgtcgcggcaatataatgagaAttattatcattaaaagatga -35 -10 +1 |
ATATAATG | ATTGCTGTT | [AIPP] [HTTIM] [IHBCE] [RS-EPT-CBR] |
[2] [3] [113] |
|
gpmMp2 | 3785187 | gpmM, envC, yibQ | 73 | gacgaaaaaaaagcgtaaatctggcatcggcttgccgcgagcggtcgtatattttgatctTcagaggctattttatcgatt -10 +1 |
TATATT | [HTTIM] [IEP] [IHBCE] |
[17] | ||
gyrBp2 | 3880150 | gyrB | 31 | atagacatgtcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggatTaacccaagtataaatgagcg -35 -10 +1 |
AAGGGTAAAAT | AAGATG | [HIPP] [ICWHO] [IEP] [IHBCE] [IMP] [TIM] |
[114] [1] [52] [17] [115] |
|
hchAp2 | 2035630 | hchA | 205 | tccacagcactaaatctctccccgccaccccgtacctctgataatggtctaaaatcattgAagccacttgcgacgacgttg -35 -10 +1 |
TGGTCTAAAAT | CCCCGT | [ICWHO] [IEP] [TIM] |
[1] [17] [116] |
|
hdeAp2 | 3656791 | yhiD, hdeB, hdeA | 51 | tctgattttgatattttccatcaacatgacatatacagaaaaccaggttataacctcagtGtcgaaattgattcgtgacgg -35 -10 +1 |
TATAACCT | TGACA | [HIPP] [IDA] [IEP] [IHBCE] [RS-EPT-CBR] [TIM] |
[53] [55] [92] [3] |
|
hdeDp2 | 3656960 | hdeD | 35 | taggaaatttttattaaatcgactgcattcttagacgcgtttttggcatagattgatagcAggggattttcttcttaattt |
[HIPP] [IEP] [IPI] [RS-EPT-CBR] [TIM] |
[94] [92] [3] [35] |
|||
hdfRp | 3948021 | hdfR | 54 | cacgctcctaattctttgaccgagctagttatggcgcggagtattagttacgcttgacagAgtgtaaaacaaaacatttaa -35 -10 +1 |
TTAGTTACGCT | CTAGTT | [ICWHO] [IHBCE] |
[66] [1] |
|
hmpp | 2685797 | hmp | 38 | tttctgaaaaacaccaaagaaccatttacattgcagggctattttttataagatgcatttGagatacatcaattaagatgc -35 -10 +1 |
TTTTTTATAAG | TTTACA | [APIORCISFBSCS] [CV(RPF/TIM)] [HIPP] [ICWHO] [RPF] [TIM] |
[1] [117] [118] |
|
hofMp | 3522928 | hofP, hofO, hofN, hofM | 177 | ttaatgtcgccacatccggcagttgtggctcgatgtagcggtataggccataaatcgagcCtgctcccagcagaatgcaac -35 -10 +1 |
TAGGCCATAAA | GTGGCT | [AIPP] [ICWHO] |
[66] [1] |
|
hyaAp2 | 1031984 | hyaA, hyaB, hyaC, hyaD, hyaE, hyaF | 155 | aaaagataaatccacacagtttgtattgttttgtgcaaaagtttcactacgctttattaaCaatactttctggcgacgtgc -35 -10 +1 |
TTCACTACGCT | TTGTTT | [HIPP] [ICWHO] [IEP] [IHBCE] [IMP] [TIM] |
[25] [1] [17] [119] |
|
idlPp | 4556856 | idlP, iraD | 57 | gacttttttcctgaaaagtcagtagatattcataggcaagtaaggttttatactttgctgAcaggattcaggcctgtctca -35 -10 +1 |
GGTTTTATACT | GATATT | [HIPP] [ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
[1] [62] [120] [3] |
|
ihfAp4 | 1795721 | ihfA | 169 | gatattttatccgaatgtaagaaagttggcgtaaatcaggtagttggcgtaaacttatttGacgtgtaccgcggtaagggt -35 -10 +1 |
TGGCGTAAACT | TTGGCG | [HIPP] [ICWHO] [IHBCE] [TIM] |
[121] [1] [122] |
|
ihfBp2 | 963749 | ihfB | 79 | tttattccgaagtttgttgagtttacttgacagattgcaggtttcgtcctgtaatcaagcActaagggcggctacggccgc -35 -10 +1 |
CGTCCTGTAAT | TTGACA | [HIPP] [ICWHO] [IHBCE] [TIM] |
[121] [1] [123] |
|
ilvYp2 | 3957867 | ilvY | 47 | gtttgcgagattgaattcactatatgacaggaaatttattgcggaaattgatatattcacAacgtcacattgcaatttttg -35 -10 +1 |
TTGCGGAAATT | TATATG | [HIPP] [ICWHO] [IEP] [IHBCE] [IMP] [TIM] |
[1] [17] [124] [125] [126] |
|
insC-5p | 3186040 | insC5, insCD5, insD5, yqiH, yqiI, yqiG | 147 | gttcgcccggccacatcattaacggattaatgataagtggatcagatgtataaaaaattaAaattaaccacaataagcgaa -10 +1 |
TATAAA | [HTTIM] [IEP] [IHBCE] |
[17] | ||
insN-1p | 270226 | insI1, insN | 377 | tttgctaagagcttcattcatgaatccttttcactagggatgaagtggtttactgaatttGgccacctgaacagaggtgat -10 +1 |
TGGTTTACT | [HTTIM] [IEP] [IHBCE] |
[17] | ||
katEp | 1813814 | katE | 53 | aacaccgtttccagaatagtctccgaagcgggatctggctggtggtctatagttagagagTtttttgaccaaaacagcggc -35 -10 +1 |
TGGTCTATAGT | CCGAAG | [ICWHO] [IEP] [IMP] [TIM] |
[1] [17] [127] [128] |
|
kbpp4 | 2796814 | kbp | 28 | attaaacctgtgctcatccccgcggcgttaacgcgccgcgttcctctgctacactttctgAgtgtttccgttaacgaatga -10 +1 |
GCTACACT | [ICWHO] | [1] | ||
ldcCp | null | ldcC | [IMP] [TAS] |
[129] [130] [131] |
|||||
lsrAp | 1601460 | lsrA, lsrC, lsrD, lsrB, lsrF, lsrG, tam | 30 | atatgtgcaatgtccacctaaggttatgaacaaattaaaagcagaaatacatttgttcaaAactcacctgcaaaactgaac -35 -10 +1 |
AATACATTTGT | ATGAAC | [AIPP] [ICWHO] |
[66] [1] [132] [133] |
|
luxSp1 | 2815065 | luxS | 332 | tgcttcgataatcccgatctgactttctctgcccgtatcttaaggtctatgattgatactGgtattggcggaacaggcaaa -35 -10 +1 |
AGGTCTATGAT | TCTCTG | [HIPP] [ICWHO] [IHBCE] [TIM] |
[1] [134] |
|
mdtAp | 2153979 | mdtA, mdtB, mdtC, mdtD, baeS, baeR | 37 | ccagacagtgtttcataattcctccatttttctcccttattggctggctacactagtatcAttccgcgaaacgtttcagga -35 -10 +1 |
CTGGCTACACT | CATTTT | [AIPP] [ICWHO] |
[66] [1] |
|
metKp2 | 3086577 | metK | 129 | gattcaaaaaaaagtggaaatagggtgaagaattgacctaaaatagccatccagatgttaAtccatccataccgattaaca |
[HIPP] [IEP] [IPI] [TIM] |
[35] [135] |
|||
mglBp2 | 2240566 | mglC, mglA, mglB | 218 | cgctttcaatctgtgagtgatttcacagtatcttaacaatgtgatagctatgattgcaccGttttaacgttgtaacccgta -35 -10 +1 |
ATAGCTATGAT | CACAGT | [HIPP] [ICWHO] [IMP] |
[136] [1] [137] |
|
micFp2 | 2313084 | micF | 0 | aagtatttgacagcactgaatgtcaaaacaaaaccttcactcgcaactagaataactcccGctatcatcattaactttatt |
[HIPP] [IEP] [IPI] [TIM] |
[138] [35] |
|||
mlrAp2 | 2214840 | mlrA | 26 | tagatgcacaaaaaacgggcaaaactacctggttcgcaaaactgcgtctaaagttaaaccGggacctcgcgagcaagggtg -35 -10 +1 |
GCGTCTAAAGT | TACCTG | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[139] [1] [140] |
|
mnmGp2 | 3925674 | rsmG, mnmG | 41 | atacccaggatcccaggtctttctcaagccgacaaagttgagtagaatccacggcccgggCttcaatccattttcataccg |
[IEP] [TIM] |
[141] [52] |
|||
mplp | 4455728 | mpl | 57 | ctcaatgttgcgctcaggtgaatcgcgccagcaaattacggattatcctgaaatgcgtttCtcacttgcccgacatatgcg -35 -10 +1 |
CGGATTATCCT | TCGCGC | [HIPP] [ICWHO] |
[1] [142] |
|
msyBp | 1114213 | msyB | 32 | atcgaactgatttttcgcctttcatacttgcaaaagcggagaatcagctatccttttcccTgaaacctcatcaactcaaag -35 -10 +1 |
TCAGCTATCCT | TTGCAA | [ICWHO] [TIM] |
[1] [23] |
|
mtnp2 | 179183 | yadS, btuF, mtn | 30 | gtgccatgtcctctcccgcgtgagaaatacgcttccccgtaagcgcatggtaaactatgcCttcaaatcgggcttatcgcg -35 -10 +1 |
CATGGTAAACT | TACGCT | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[1] [143] |
|
murQp | 2545733 | murQ, murP | 40 | tgcgagtgtagactcaatgattcctttaagcctgtcaattcgggatatatgattccatacAtctgcaattatttgatcgta -35 -10 +1 |
TATATGATTCC | TTAAGC | [ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
[1] [144] [17] [3] |
|
murRp2 | 2545793 | murR | 184 | gcacatttccagcgtcgatacgcggtcaatttcagccgaggcggtgttcgagccttcagtAatcatcttttcaaattgcat -35 -10 +1 |
TGTTCGAGCCT | ATTTCA | [ICWHO] [IHBCE] [TIM] |
[1] [144] [17] |
|
mutSp | 2857019 | mutS | 74 | accagcatcaagaactcgccgttcgcttcttcccctgaaatgattaactccggtatcatgTgcgccttatgtgattacaac -35 -10 +1 |
TCCGGTATCAT | TTCCCC | [ICWHO] [IEP] [TIM] |
[1] [77] [145] |
|
narUp2 | 1544163 | narU | 103 | tctggctacttaatccccattctgcccccgcggttacgctttcttatctattctttcaatCagcacttcacccaattcatc -35 -10 +1 |
TTATCTATTCT | CCCGCG | [APIORCISFBSCS] [HIPP] [ICWHO] |
[146] [1] |
|
nhaAp2 | 17317 | nhaA, nhaR | 172 | tacttttcctaattaatccctcaggaatcctcaccttaagctatgattatctaggcttagGgtcactcgtgagcgcttaca -35 -10 +1 |
TTATCTAGGCT | CTCACC | [ICWHO] [TIM] |
[147] [1] |
|
ompFp2 | 987092 | ompF | 110 | ctttatctttgtagcactttcacggtagcgaaacgttagtttgaatggaaagatgcctgcAgacacataaagacaccaaac |
[IEP] [RS-EPT-CBR] [TIM] |
[148] [52] [3] |
|||
osmBp | 1343369 | osmB | 41 | gcgcgagcagatttcacggaataatttcaccagacttattcttagctattatagttatagAgagcttacttccgtgaatca -35 -10 +1 |
TTAGCTATTAT | TTTCAC | [APIORCISFBSCS] [HIPP] [ICWHO] [IHBCE] [TIM] |
[149] [150] [1] [151] [152] [17] |
|
osmBp1 | 1343476 | osmB | 148 | ctggttgataattaagactatttacctgttattaacactctcaagatataaaattattatCagcgatataacaggaagtca -35 -10 +1 |
AAAATTATTAT | TTAACA | [ICWHO] [TIM] |
[149] [1] [151] |
|
osmCp2 | 1556606 | osmC | 19 | attcggaatatcctgcttatcctcgtgctgtttctcacgtagtctataatttcctttttaAgcccacaggagagcaacaat -35 -10 +1 |
TAGTCTATAAT | TCGTGC | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[153] [154] [155] [156] [1] |
|
osmEp2 | 1822283 | osmE | 27 | aagcggagccgtttcgttcacgggcttgaaaaagcgcccaatgtattccaggcttatctaAcacgctgataaacaagagga -35 -10 +1 |
TATTCCAGGCT | TTGAAA | [APIORCISFBSCS] [HIPP] [ICWHO] [IDA] [IEP] [IHBCE] [RS-EPT-CBR] [TIM] |
[157] [153] [158] [159] [1] [17] [3] |
|
osmFp1 | 2219523 | yehW, yehX, yehY, osmF | 42 | attctgcaactgaatccttccgctcaagctaaccccgccattatcaactatgcttttctcTtaattcgctgaaaacaacag -35 -10 +1 |
TCAACTATGCT | CAAGCT | [ICWHO] [RS-EPT-CBR] [TIM] |
[160] [1] [3] |
|
osmYp2 | 4611153 | osmY | 243 | ttgcttatgttttcgctgatatcccgagcggtttcaaaattgtgatctatatttaacaaaGtgatgacatttctgacggcg -35 -10 +1 |
TGATCTATATT | CCCGAG | [APIORCISFBSCS] [HIPP] [ICWHO] [IHBCE] [TIM] |
[153] [150] [1] [161] [162] [163] |
|
otsAp | 1981651 | otsA | 39 | catcatggcgactggcgggtgtgccggatgtctggagctggcttgaaatgataaccaccgCattacaacaaaaaagagaaa -35 -10 +1 |
GAAATGATAAC | ATGTCT | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[164] [1] [165] [166] |
|
otsBp1 | 1982465 | otsA, otsB | 78 | tttcccaccatagccaaccgccataacggttggctgttcttcgttgcaaatggcgaccccCgtcacactgtctatacttac -35 -10 +1 |
ATGGCGACCCC | TTGGCT | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[164] [1] [165] [166] |
|
otsBp2 | 1982442 | otsA, otsB | 55 | taacggttggctgttcttcgttgcaaatggcgacccccgtcacactgtctatacttacatGtctgtaaagcgcgttctgcg -35 -10 +1 |
CTGTCTATACT | ATGGCG | [ICWHO] [IEP] [IHBCE] [RS-EPT-CBR] [TIM] |
[167] [1] [166] [17] [168] [3] |
|
oxyRp2 | 4158457 | oxyR | 33 | tgagcaattatcagtcagaatgcttgatagggataatcgttcattgctattctacctatcGccatgaactatcgtggcgat -35 -10 +1 |
ATTGCTATTCT | TTGATA | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[169] [170] [1] |
|
patAp | 3219458 | patA | 36 | gtgtttatcccgattttcgcgatcgcagccggagtggcgcaatccctgcaatacttaaatCggtatcatgtgatacgcgag |
[AIPP] [IEP] [TIM] |
[171] [172] |
|||
pcnBp | 159171 | folK, pcnB | 45 | cgagtcggcaattgtaaattcaacattctcaaatgcgtcatgctgagctatgattagccgCtatttttttgtcctgaatga -35 -10 +1 |
TGAGCTATGAT | TCTCAA | [HIPP] [ICWHO] [IDA] [IEP] [IHBCE] [TIM] |
[173] [1] [174] [175] |
|
pcnBp4 | 159391 | folK, pcnB | 265 | aagtgccagattacattcatctgccgctggcgcttaatccacaaggcgctaaactttccaAgcagaatcatgcgcctgcgt -35 -10 +1 |
GGCGCTAAACT | CTGGCG | [ICWHO] [IDA] [IEP] [IHBCE] [TIM] |
[1] [175] |
|
pdeRp | 1346843 | pdeR | 101 | tttttaactgactttcgtttgaaaactggcgtttttccaaaactggattacaaataaataTataaaaaaaacaatgcgttt -35 -10 +1 |
TGGATTACAAA | CTGGCG | [HIPP] [ICWHO] [IEP] [TIM] |
[176] [1] [13] |
|
pdhRp2 | 122034 | pdhR, aceE, aceF, lpd | 58 | ttcatgatttcaatcaaaacctgtatggacataaggtgaatactttgttactttagcgtcAcagacatgaaattggtaaga -35 -10 +1 |
TTTGTTACTTT | TATGGA | [HIPP] [HTTIM] [ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
[177] [1] [2] [178] [3] |
|
pfkAp | 4107474 | pfkA | 78 | accgccatttggcctgacctgaatcaattcagcaggaagtgattgttatactatttgcacAttcgttggatcacttcgatg -10 +1 |
TTATACTA | [HIPP] [HTTIM] [IHBCE] [RS-EPT-CBR] |
[179] [180] [62] [2] [3] |
||
pfkAp3 | 4107522 | pfkA | 30 | tactatttgcacattcgttggatcacttcgatgtgcaagaagacttccggcaacagatttCattttgcattccaaagttca -10 +1 |
AAGACTTCCGGC | [HTTIM] [IHBCE] |
[2] | ||
pfkBp1 | 1806351 | pfkB | 19 | ctccaataaatcatattgttaatttcttcactttccgctgattcggtgccagactgaaatCagcctataggaggaaatgat -35 -10 +1 |
GGTGCCAGACT | TTCACT | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[181] [182] [1] [23] |
|
pfkBp2 | 1806323 | pfkB | 47 | atatttatctgcaaaattttaaataaagctccaataaatcatattgttaatttcttcactTtccgctgattcggtgccaga -35 -10 +1 |
ATTTCTTCACT | TCCAAT | [ICWHO] [TIM] |
[1] [23] |
|
pgip2 | 4233722 | pgi | 36 | acattacgctaacggcactaaaaccatcacatttttctgtgactggcgctacaatcttccAaagtcacaattctcaaaatc -35 -10 +1 |
GGCGCTACAAT | CACATT | [HIPP] [HTTIM] [ICWHO] [IHBCE] [TIM] |
[183] [1] [2] |
|
poxBp2 | 911076 | poxB | 27 | ttagtgcctcctttctctcccatcccttccccctccgtcagatgaactaaacttgttaccGttatcacattcaggagatgg -35 -10 +1 |
TGAACTAAACT | TCCCTT | [HTTIM] [ICWHO] [IHBCE] [RS-EPT-CBR] [TIM] |
[184] [1] [2] [3] [162] |
|
ppkp | 2622977 | ppk, ppx | 67 | attcacctgtaaatcgcaagctccagcagtttttttcccccttttctggcatagttggacAtctgccaatattgctcgcca -10 +1 |
CATAGT | [HTTIM] [IEP] [IHBCE] |
[17] | ||
pqiAp | 1011659 | pqiA, pqiB, pqiC | 342 | gaagccgccgcggcaaaagcagaaactgtaaaacgcagcagtagcaaactaagctataaaTtgcagcgcgaactggagcag -35 -10 +1 |
CAAACTAAGCT | CTGTAA | [HIPP] [ICWHO] [IDA] [TIM] |
[1] [185] |
|
pqiAp3 | 1011666 | pqiA, pqiB, pqiC | 335 | ccgcggcaaaagcagaaactgtaaaacgcagcagtagcaaactaagctataaattgcagcGcgaactggagcagctaccgc -35 -10 +1 |
CAAACTAAGCT | CTGTAA | [HIPP] [ICWHO] [IDA] [TIM] |
[1] [186] [185] |
|
proPp2 | 4330407 | proP | 95 | actggtttgattgtacattccttaaccggagggtgtaagcaaacccgctacgcttgttacAgagattgcatcctgcaattc -35 -10 +1 |
CCCGCTACGCT | CCGGAG | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[187] [1] [188] [189] |
|
proVp | 2804563 | proV, proW, proX | 252 | taattcccgccaaatagctttttatcacgcaaataatttgtggtgatctacactgatactCtgttgcattattcgcctgaa -35 -10 +1 |
TGATCTACACT | CACGCA | [ICWHO] [IDA] [TIM] |
[190] [1] [191] |
|
pstBp2 | 3908556 | phoU, pstB | 190 | ttaccctgtgcgtactgctgctgaacattctggcgcgcgttgtttttgcgaagaataaacAcggttgatattgctgacacg -35 -10 +1 |
TTGCGAAGAAT | CTGGCG | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[1] [192] |
|
pstCp2 | 3910542 | phoU, pstB, pstA, pstC | 144 | cggggctaaacaggcgaacgacctggattacgccagcctgccggatagtgtagttgaacaGgttcgcgctgcgtggaagac -35 -10 +1 |
TGCCGGATAGT | CTGGAT | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[1] [192] |
|
pstSp2 | 3911568 | phoU, pstB, pstA, pstC, pstS | 43 | tcataaaactgtcatattccttacatataactgtcacctgtttgtcctattttgcttctcGtagccaacaaacaatgcttt -35 -10 +1 |
TGTCCTATTTT | CATATA | [HIPP] [ICWHO] [TIM] |
[193] [1] [194] [195] [196] [197] |
|
puuAp | 1360968 | puuP, ymjE, puuA | 60 | tcatttttgcaaactcaatttaacatttgacaaacatttagtttgcatacagattcgaatGgtggtcattatattttacgc -35 -10 +1 |
TACAGA | TTGACA | [AIPP] [ICWHO] [IEP] [IMP] [TIM] |
[66] [17] [198] |
|
puuCp | 1362728 | puuC, puuB, puuE | 15 | catacggcccggggatctctgcgccctgacgttcacaaactgcatatatctgatagacgtGaaacaggagtcataatgaat -10 +1 |
TCTGAT | [HTTIM] [IEP] [IHBCE] |
[17] | ||
puuDp | 1361052 | puuD, puuR, puuC, puuB, puuE | 68 | atgtttgtcaaatgttaaattgagtttgcaaaaatgaaaacccactgctagattgaaaaaAtattgaacataaaggtcatt -35 -10 +1 |
TAGATT | TTGCAA | [HTTIM] [IEP] [IMP] [TIM] |
[17] [62] [198] |
|
pykAp | 1937544 | pykA | 105 | ttgataagcagttacttaatttaagtgacgatcgctaaaaacgactgtcactgtcctaatCttatacgacatccgaatgag -10 +1 |
TCACTGTC | [HTTIM] [IHBCE] [RS-EPT-CBR] |
[62] [2] [3] |
||
pykAp3 | 1937494 | pykA | 155 | attcagagataacttgaagcgggtcaaagaagcgctgaaggaatcgcgttttgataagcaGttacttaatttaagtgacga -10 +1 |
TTTTGATA | [HTTIM] [IHBCE] [RS-EPT-CBR] |
[62] [2] [3] |
||
pykFp4 | 1755600 | pykF | 98 | ggctgagacacaagcacacattcctctgcacgctttttcgatgtcacctatccttagagcGaggcaccaccactttcgtaa -10 +1 |
CTATCCTT | [HTTIM] [IHBCE] [RS-EPT-CBR] |
[62] [2] [3] |
||
pykFp5 | 1755663 | pykF | 35 | gcaccaccactttcgtaataccggattcgctttccggcagtgcgcccagaaagcaagtttCtcccatccttctcaacttaa -10 +1 |
CCAGAAAG | [HTTIM] [IHBCE] |
[62] [2] |
||
ravAp | 3931128 | viaA, ravA | 35 | aaataccccccctttgagactattttagccaccagcaagaaacgtctatactcgcaatttAcgcagaacttttgacgaaag -10 +1 |
CTATACT | [HTTIM] [IHBCE] |
[62] [199] |
||
rhaSp2 | 4097711 | rhaS, rhaR | 25 | tacgtggttttccgtcgaaaatttaaggtaagaacctgacctcgtgattactatttcgccGtgttgacgacatcaggaggc -35 -10 +1 |
GTGATTACTAT | AAGGTA | [ICWHO] [IEP] [IHBCE] [TIM] |
[200] [1] [17] [201] [202] [203] |
|
rpoEp4 | 2710230 | rseC, rseB, rseA, rpoE, rseD | 66 | ttactggctggtggaggattaggtggtgaaataaaaaggccgttgggttactcttcaggcAgttaaatgggcatttctaca -35 -10 +1 |
TACTCT | GTGAAA | [IEP] [IHBCE] [IPI] [RS-EPT-CBR] [TIM] |
[204] [3] |
|
rpoHp2 | 3601003 | rpoH | 220 | acggtacaacatttacgccactttacgcctgaataataaaagcgtgttatactctttcccTgcaatgggttccgtagcagg -35 -10 +1 |
CGTGTTATACT | ACGCCT | [HIPP] [ICWHO] [IDA] [IHBCE] [IPI] [TIM] |
[205] [206] [1] [207] [208] [175] [209] |
|
rraAp | 4119358 | rraA | 28 | caaatatcaattaacaattgatgattttgccaacagcccacatagcgcgatatactgaaaAttctcgcagcaactgaatgt -35 -10 +1 |
AGCGCGATATA | TTGCCA | [HTTIM] [ICWHO] [RS-EPT-CBR] [TIM] |
[1] [62] [3] [210] |
|
rsdp1 | 4196954 | rsd | 146 | gatcgaaatttgccgcttcgccatatggcaattctcccttcggcaaccataatttttgttCatggctgacgacccaccagc -35 -10 +1 |
GCAACCATAAT | ATGGCA | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[1] [211] |
|
rssAp | 1289106 | rssA, rssB | 139 | atcaggtgcaaccttttcaccagacacataagggtggcaacataggctatactcgacagcActaccacagggacaaagctg -35 -10 +1 |
TAGGCTATACT | CACATA | [ICWHO] [IHBCE] [IMP] [RS-EPT-CBR] [TIM] |
[1] [212] [213] [3] |
|
rssBp | 1290220 | rssB | 22 | ttatctacacttaagttaattctgacaggcgcaggtggcaatagcatgccactattgagtAaagccagtcaggggagagaa -35 -10 +1 |
CATGCCACTAT | CAGGCG | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[1] [213] |
|
ryjAp | 4278066 | ryjA | 0 | tgcggttaaaaagtatacttttacactggcgaagaaacgtcggtgacatacaattaaagcAtcaacaccaaccggaacctc -35 -10 +1 |
TACAAT | CTGGCG | [IHBCE] [TIM] |
[214] [215] |
|
sdsNp1 | 1996921 | sdsN | 0 | tatcatttataatgataattcaaactatcacataaataagatttatatataatttatattAttcaggcaatgaattacttt -35 -10 +1 |
TTATATATAATTTA | CTATCA | [HIPP] [IEP] [IHBCE] [IMP] [TIM] |
[215] | |
sdsNp2 | 1996880 | sdsN | 41 | ccttatcctgcatagtaaaccgcaacgcccctgagagtgagtatcatttataatgataatTcaaactatcacataaataag -35 -10 +1 |
TCATTTATAATGA | CGCCCC | [HIPP] [IEP] [IHBCE] [IMP] [TIM] |
[215] | |
sdsRp | 1923207 | pphA, sdsR | 0 | tttttattgaccattttgcacgcaaactggaaaacctggcgtcgtcatctattcttaaagGgcaaggcaactaagcctgca -35 -10 +1 |
TATTCT | CTGGAA | [HIPP] [IDA] [IHBCE] [IMP] [TIM] |
[216] [215] [217] |
|
sgrSp2 | 77367 | sgrS, sgrT, setA | 0 | gaactcctgtgcaaaagacagcaattttattttccctatattaagtcaataattcctaacGatgaagcaagggggtgcccc -35 -10 +1 |
AAGTCAATAAT | TTTATT | [AIPP] [ICWHO] [IHBCE] [TIM] |
[1] [17] [218] |
|
sodCp | 1724679 | sodC | 24 | gtaagcacttttaggaatagccgccgttcaaaaatgtgtcactggtttacacttattcagGaatgcacaatgaacggaggt -35 -10 +1 |
TGGTTTACACT | GCCGTT | [HTTIM] [ICWHO] [IHBCE] [TIM] |
[1] [219] [62] |
|
sohBp | 1329284 | sohB | 48 | aaatggatactttgtcatactttcgctgcaataacatctctgcgagacggcttaacatgcCtgttgtaaactgtgagccaa -35 -10 +1 |
TCTGCGAGACG | TTCGCT | [APIORCISFBSCS] [HIPP] [ICWHO] |
[1] [142] |
|
speBp | 3083946 | speB | 149 | gaactgcaacaacagttccttgaagagttcgaggcaggtttgtacggttatacttatcttGaagatgagtaagtcctgtgt -35 -10 +1 |
ACGGTTATACT | TTCGAG | [HIPP] [ICWHO] [IHBCE] [TIM] |
[1] [17] [220] |
|
speCp | 3109175 | speC | 20 | accagtttgacccatatctcatggggcagggttttccaccttgtccggtattcttacttcCccgaaacgggtttgcgctta -35 -10 +1 |
TCCGGTATTCT | CAGGGT | [AIPP] [HIPP] [ICWHO] |
[221] [1] |
|
srap | 1556046 | sra | 83 | acgatcaattatgtggtcagtggccagcaccctacgctttaaggtgctatgcttgatcggCaacctaatttaggggtttag -35 -10 +1 |
GGTGCTATGCT | CCAGCA | [ICWHO] [IEP] [TIM] |
[1] [39] [23] |
|
ssrSp | 3055759 | ssrS, fau | 224 | gcagcggacgatctgaaccaacggttgcaagatctgaaagaacgcactagagtcacaaatActgaacagttggtcttcatt -35 -10 +1 |
CGCACTAGAGT | TTGCAA | [AIPP] [ICWHO] [RS-EPT-CBR] [TIM] |
[222] [1] [223] [3] |
|
sucAp | 758586 | sucA, sucB, sucC, sucD | 120 | cgtaacaaagaaatgcaggaaatctttaaaaactgcccctgacactaagacagtttttaaAggttccttcgcgagccacta -35 -10 +1 |
GACACTAAGAC | TTTAAA | [ICWHO] [TIM] |
[177] [1] [4] |
|
talAp1 | 2578588 | talA, tktB | 78 | ctataacactgatgttacctgcttaatccagcaataccatgcctgtctgctatgctttttTgatgcgtttagcgaaatttc -35 -10 +1 |
TCTGCTATGCT | CAGCAA | [ICWHO] [IEP] [TIM] |
[1] [23] [17] |
|
talAp2 | 2578570 | talA, tktB | 96 | aatgttttggtaataatcctataacactgatgttacctgcttaatccagcaataccatgcCtgtctgctatgcttttttga -35 -10 +1 |
CCAGCAATACC | ATGTTA | [ICWHO] [IEP] [TIM] |
[1] [23] [17] |
|
tamp | 1607221 | tam | 125 | gcctataaagatgaagacgcagtggcgttccataaaaccacgccccactacaaaacctgtGtcgcgaaactggaatcttta -10 +1 |
CTACAAA | [HTTIM] [IEP] [IHBCE] |
[17] [74] |
||
tktBp | 2579308 | tktB | 328 | gtggtggaagaagatccgggcgttaaatcggtgcgcaatatctacgactactataagcaaCaccactatgaaaccattgtg -35 -10 +1 |
ACGACTACTAT | ATCGGT | [APIORCISFBSCS] [HIPP] [ICWHO] |
[1] [224] |
|
tolCp4 | 3178074 | tolC, ygiB, ygiC | 41 | ggcacgtaacgccaaccttttgcggtagcggcttctgctagaatccgcaataattttacaGtttgatcgcgctaaatactg -35 -10 +1 |
TCCGCAATAAT | TAGCGG | [AIPP] [ICWHO] [RS-EPT-CBR] [TIM] |
[1] [3] [225] |
|
topAp | 1330789 | topA | 259 | cacgctggtggcaagagcgccttactggcaactttggattttgcatgctaataaagttgcGtatcggattttatcaggtac -35 -10 +1 |
CATGCTAATAA | CTGGCA | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[1] [226] |
|
tpiAp | 4111569 | tpiA | 62 | ggtttgaataaatgacaaaaagcaaagcctttgtgccgatgaatctctatactgtttcacAgacctgctgccctgcggggc -10 +1 |
CTATACTG | [HTTIM] [IHBCE] [RS-EPT-CBR] |
[62] [2] [3] |
||
treAp | 1247425 | treA | 49 | tgacagttcgcagaatgagatttcgatcatgcagctagtgcgatcctgaactaaggttttCtgatacttgaataccgtttt -35 -10 +1 |
TGAACTAAGGT | ATGCAG | [APIORCISFBSCS] [HIPP] [ICWHO] [IMP] [TIM] |
[164] [1] [227] |
|
treFp | 3669551 | treF | 41 | aacgtgatccaccgcacgctttgtcgcccaccaggcggagcgaatgactacccttaaagaAaagccgataattagcgacga -10 +1 |
TGACTACCCT | [HTTIM] [IEP] [IHBCE] |
[17] | ||
uspBp | 3639848 | uspB | 128 | gaatatattgatagtggttaaccttctggaaaaaaaacaacctgatctcctacactatctAtagagccgctcgtatgttgg -35 -10 +1 |
TCTCCTACACT | CTGGAA | [HIPP] [ICWHO] [IEP] [IHBCE] [IMP] [TIM] |
[228] [1] [40] |
|
wrbAp | 1067758 | yccJ, wrbA | 50 | ataaatcaaataagtggttgtgaaatttgcactctgaaaaggacgtcttatctttaaataAgtggtagcgaatcgctacgg -35 -10 +1 |
TATCTTT | TTGCAC | [HTTIM] [IEP] [IHBCE] [RS-EPT-CBR] |
[55] [62] [3] |
|
xapAp2 | 2524910 | xapB, xapA | 32 | tattgaatgcgtgagaaaagtgtattggtaagagccgggacaacctcgctataaaaaggcGttagattccaccctacagaa -35 -10 +1 |
CTCGCTATAAA | TTGGTA | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[1] [17] [229] |
|
xthAp | 1832399 | xthA | 29 | atcgatcaaatcacttaacaacaggcggtaagcaacgcgaaattctgctaccatccacgcActctttatctgaataaatgg -35 -10 +1 |
TCTGCTACCAT | GCGGTA | [HIPP] [ICWHO] [RS-EPT-CBR] [TIM] |
[1] [3] [230] |
|
yabIp | 71271 | yabI | 80 | gtttcgtgccggttgtgaagaaaaagtgaatgatgtagccgtcaagttgtcataattggtAacgaatcagacaattgacgg -10 +1 |
TGTCATAAT | [HTTIM] [IHBCE] [RS-EPT-CBR] [TIM] |
[62] [3] [231] |
||
yadVp2 | 156224 | htrE, yadV | 23 | aattgattgaatgaatatacagggaataataatttctattttatattattccctgttttaAttaactctatcagggatggt -35 -10 +1 |
TATATTATTCC | GGGAAT | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[1] [232] |
|
ybgAp1 | 738980 | ybgA, phr | 21 | gtcctgctacaacaggattaacttcacaaatatcatttctcaacgtctacacttactcctGtaaaccgctcaggagcagta -35 -10 +1 |
ACGTCTACACT | TTCACA | [ICWHO] [IEP] [IHBCE] [RS-EPT-CBR] [TIM] |
[1] [23] [233] [3] |
|
ybgAp2 | 738920 | ybgA, phr | 81 | cagctatggttagaaactacctgacgtcagtccttgcggggagcaggctttcgtaaatttGtcctgctacaacaggattaa -35 -10 +1 |
TTCGTAAATTT | TTGCGG | [ICWHO] [IEP] [TIM] |
[1] [23] |
|
ybiIp6 | 838484 | ybiI | 28 | tggtcggagatctgatgcttgaactgcccgagttcgtccctggattagctacacttaactGtacaagtattgatatgggga -10 +1 |
GCTACACT | [ICWHO] [IDA] [IHBCE] |
[1] [43] |
||
ybjPp | 904523 | ybjP | 56 | ccttgtttgctaagccttcgatctcaaaagcattatcagactgatacgctattattgaaaGgatatcattattatcgtaga -35 -10 +1 |
TACGCTATTAT | CAAAAG | [ICWHO] [TIM] |
[1] [23] |
|
ycgZp2 | 1215752 | ycgZ, ymgA, ariR, ymgC | 37 | gcaaaaaattaatttatcattctgtacacatatttcgtacaagtttgctattgttacttcActtaacattgattaacattt -35 -10 +1 |
TTTGCTATTGT | TACACA | [HIPP] [ICWHO] [IEP] [IHBCE] [TIM] |
[66] [1] [234] [235] |
|
yciGp | 1316092 | yciE, yciF, yciG | 57 | ccctctatcttctcgttgcgcttaatttgactaattctcattagcgactaattttaatgaGtgtcgacacacaacactcat -35 -10 +1 |
GCGACTAATTT | TTGACT | [AIPP] [HIPP] [ICWHO] |
[1] [236] |
|
yciTp | 1344510 | yciT | 164 | gatattgtgttagatatccttgtggcaggcgattaccactctgcgatccataatctcgagAtacttaaagcagaactcttg -10 +1 |
CCATAAT | [HTTIM] [IEP] [IHBCE] |
[17] | ||
yciZp | 1344638 | yciT, yciZ | 29 | gataattagccgttgctgttaaacacttctcttttagcggcaatttttgcattattcattTtcccccttttgctataagga -35 -10 +1 |
TGCATTATTCA | CTTTTA | [ICWHO] [IEP] [IHBCE] [TIM] |
[237] [1] [17] |
|
ydbDp | 1475066 | ydbD | 78 | ggagaatatggctgctgaaaaattgcatctttctgaggaagtgttgtctacgttggatggTatttcgcgagaataacgaat -35 -10 +1 |
TTGTCTACGTT | CATCTT | [AIPP] [ICWHO] [IEP] |
[66] [1] [74] |
|
ydbKp4 | 1440846 | ompN, ydbK | 62 | cgctgatgtgggggacacaaaagcgaaaatgcagaagaaagccatttgctaaaattgaaaGattactactgggcgcgcagc -10 +1 |
TAAAAT | [ICWHO] [IDA] [IHBCE] |
[1] [43] |
||
ydcSp1 | 1511599 | ydcS, ydcT, ydcU, ydcV, patD | 55 | gaataaattttctcaggggcgaaggtgtgcctgcaagccgccgtctatggttaaacaaggAgatatttttacggcacggcg -10 +1 |
TCTATGGTTAA | [HIPP] [IDA] [IHBCE] |
[238] | ||
yddGp | 1547205 | yddG | 36 | gcggtagaaaaacgcaccactgcctgacaggccagttaaaaaaatgctataaaattcagcTtaatttttaacggcaagaga -35 -10 +1 |
AATGCTATAAA | CTGACA | [ICWHO] [IEP] [IHBCE] [TIM] |
[1] [239] |
|
ydhYp | 1754642 | ydhT, ydhU, ydhX, ydhW, ydhV, ydhY | 165 | tgtaattttaattgataacgatcaatgttaagggctcagaataatcacattattttttctCctaaccataaaggattagtt -35 -10 +1 |
CACATTATTTT | TTAAGG | [ICWHO] [IEP] [IHBCE] [TIM] |
[1] [17] [240] |
|
yeiLp | 2255290 | yeiL | 65 | aaagaaaattcgaccgggccgatgattgaatcttaacaacagcgtacgtatgctaaatatGagaaatctcatagcggataa -35 -10 +1 |
TATGCTAAATA | TTAACA | [APIORCISFBSCS] [HIPP] [ICWHO] [TIM] |
[241] [1] |
|
yffOp | 2562053 | yffO, yffP | 58 | acgccaaaattagcgctgaattaatgggtaattattgcggtttttgtcaattttcaacctCaattcttgcgaaaaatggca -10 +1 |
TGTCAATTT | [HTTIM] [IEP] [IHBCE] |
[17] | ||
yggEp1 | 3068126 | yggE | 46 | ccttgttcagttaggcgctatctgatggaaaaataaaacagaggcgctaagcttgcctccAgaggtcctgaattttgggca -35 -10 +1 |
GGCGCTAAGCT | ATGGAA | [ICWHO] [RS-EPT-CBR] [TIM] |
[1] [23] [3] |
|
yggEp2 | 3068185 | yggE | 105 | atgtgttatgtggtttattgccttgcagctggcgagagacggtattgctcatgcacaagcCttgttcagttaggcgctatc -35 -10 +1 |
TTGCTCATGCA | CAGCTG | [ICWHO] [TIM] |
[1] [23] |
|
yhfGp | 3491648 | pabA, fic, yhfG | 28 | caatcttgcccgcgcttctgctctcccggcgtaacccggatttgccgcttatacttgtggCaaatggacacgttcagggag -10 +1 |
TATACT | [CV(RPF/RS-EPT-CBR)] [CV(RPF/TIM)] [HIPP] [IEP] [IHBCE] [IMP] [IPI] [RPF] [RS-EPT-CBR] [TIM] |
[153] [242] [3] [243] [244] |
||
yhiMp | 3634743 | yhiM | 98 | tggccttttgaacgctgaaaagtagcgctctgcaaagtaaaccccgctatagttatgctaTgcatttgtctttaatgatat -35 -10 +1 |
CCCGCTATAGT | TAGCGC | [AIPP] [ICWHO] [IEP] [IHBCE] [IPI] |
[66] [1] [35] |
|
yhjGp | 3678412 | yhjG | 62 | tttcacgcccggcaccgatagaaacgctgaatacggcggttctggcgctataagctgcctCattttccgcctggctggact -10 +1 |
CTATAAG | [HTTIM] [IEP] [IHBCE] |
[17] [74] |
||
yiaGp | 3719431 | yiaG | 47 | agccagagcatgccctgacttcaccccgctgtgtctgcttttcccgactattcttaatgaGcttcgatgcaattcacgatc -35 -10 +1 |
CCGACTATTCT | CCGCTG | [ICWHO] [TIM] |
[1] [23] |
|
yihGp | 4046652 | yihG | 50 | attttttctaatgtggatagatatgaattatttttctccttaaggatcatccgttatttgGgtcgttttctgctaaaatct -35 -10 +1 |
AGGATCATCCG | ATGAAT | [HIPP] [ICWHO] [IHBCE] [TIM] |
[1] [245] |
|
yjcCp | 4275418 | pdeC | 53 | atttcaaatcaggcaaaagtgctatttataccgtaagatttatctaaagacgtcggtaccCagggttttcaccttgcaatg |
[HTTIM] [IEP] |
[246] [13] |
|||
yjiYp | 4591367 | btsT | 88 | aaataaccactcagttatttaccttactttacgcgcgcgtaactctggcaacatcactacAggatagcggtcaatttacct -35 -10 +1 |
TGGCAACAT | CTTTACG | [IHBCE] [TIM] |
[247] | |
ymiCp | 1335424 | ymiC, acnA | 148 | aatgttccgtcgttattccagacgactggcaactaacatcgcagcagcaagcctttatagAactgtttgctgaagatgatc -35 -10 +1 |
GCAGCAAGCCT | CTGGCA | [HIPP] [ICWHO] [IHBCE] [IMP] [TIM] |
[88] [1] |
|
ynfBp | 1655709 | ynfB, speG | 99 | aaaatagtaacgttgttttaatcatctttgtctcttattgacatcatgtatagttataggGcgacataatatcatcaatat |
[HTTIM] [IEP] [IPI] |
[62] [35] |
|||
ynfEp2 | 1658003 | ynfE, ynfF, ynfG, ynfH, dmsD | 66 | tcatacccttctattgatatggattaataattcttaacccaaaatgggtagactccctctAttgttagcgcgctaaatatt -35 -10 +1 |
ATGGGTAGACT | TTAATA | [AIPP] [ICWHO] [IHBCE] [RPF] |
[1] [248] [17] [249] |
|
ytfKp | 4439511 | ytfK | 76 | ctttaggtaaaaaaagttatacgcggtggaaacattgcccggatagtctatagtcactaaGcattaaaatttgcgcctcat -35 -10 +1 |
TAGTCTATAGT | GTGGAA | [ICWHO] [RS-EPT-CBR] [TIM] |
[1] [23] [3] |
|
znuAp | 1942661 | znuA | 78 | gaggacgcggcgttggccaaaagaaaccgagacattttccagggaaaccagacttgtcatGttaattttagtcttgcagta -35 -10 +1 |
GAAACCAGACT | CCGAGA | [AIPP] [ICWHO] |
[1] |
Evidence: | [HTTIM] High-throughput transcription initiation mapping [ICWHO] Inferred computationally without human oversight [IHBCE] Inferred by a human based on computational evidence [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates [TIM] Transcription initiation mapping [AIPP] Automated inference of promoter position [IDA] Inferred from direct assay [IEP] Inferred from expression pattern [IMP] Inferred from mutant phenotype [APIORCISFBSCS] A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence. [HIPP] Human inference of promoter position [CV(RPF/RS-EPT-CBR)] cross validation(RPF/RS-EPT-CBR) [RPF] RNA polymerase footprinting [IPI] Inferred from physical interaction [CV(RPF/TIM)] cross validation(RPF/TIM) [NTAS] Non-traceable author statement [ICA] Inferred by computational analysis [AIBSCS] Automated inference based on similarity to consensus sequences [TAS] Traceable author statement |
Reference(s) |
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